Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00354 ATGATGAAGAAGAAGAAGAAGAAGAAGAAAGTATACTCCTCCAATGTCACACTGGTGATTGCGTTGTTTGTAATTGGAGGCACACTAAACTCTCAGTCTCAGACCGCCTGCGCCTCCGGGTTGGGGGAGAGAGGAGAAAATGAGAGCATAGATGCCTCCCTTGTCTTCGAAAATGAGCGTCTCAGAAACGCTTTTATAGCATTGCAAGCTTGGAAGCAAGCCATTTTGTCGGATCCTCGTAACCAGACAAGCGATTGGGTAGGATCGAAAGTCTGCTCATACAACGGGGTGTACTGTGCTCCCGCGCTCGACAACCCCAACATCCGTACCGTCGCCGGCATTGATCTAAACCACGGGGACATTGCCGGTTATTTACCCCAAGAGCTGGGTCTGCTCGTAGATCTTGCACTGTTCCACATCAACTCGAATAGATTCTGCGGCAATGTGCCGCACAACTTCCACAGCTTGATACTGCTCTACGAACTGGATCTCAGTAACAACAGGTTCGCAGGCAAGTTCCCGGAGGTGGTTCTGCGCCTTCCATCACTCAAGTTCTTGGATCTCAGGTTCAACGAATTCGAGGGAGCGGTTCCCAGAGAGTTGTTCGATAAGGATCTTGACGCCATTTTCATAAACGACAATCGTTTCGTCTTGGATATCCCCGACAACTTGGGCAACTCCCCGGTGTCCGTGTTGGTACTGGCGAACAACAGGTTCCAGGGGTGCATTCCGGCCAGCCTGGGAAACATGTCCAAGTTGAACGAGATCATTTTTATGAACAACCAATTCCGGTCCTGCTTGCCTTCAGAGATTGGGCTTTTGAAGAACCTGACGGTGTTTGACGTCAGCTTCAACCAGCTGCTTGGTCCCTTGCCCAACGCCATTGGAAACTCTGTCAGCCTCGAGCAGCTCAATGTCGCCCACAACTTACTCTCCTCTCGAATTCCACCTTCCATTTGTATGCTCCCTCACCTTCACAACTTCACATTTTCTTTTAACTTTTTCACCGGCGAGCCACCCGCTTGTCTCGCCTTACCCGCCTTTGATGACACCGTCAACTGCTTGCCTTCCAGACCCCTTCAGAGACCTCCCTCCCAATGTACGTCCTTCCTCTCCAACCCCCCTGTCGACTGTAACTCCTTTAAGTGTAAACCATTTGTGCCATCACCATCACCATCACCATCACCTGCTACTCCTTCTCCATCTCCATCTCCGTCGGGGCATTCCCCTCCACCTATTCATACTCCTCTTCAGCCCACACTCCACCTTCACCTTCACCTGCCACCCCATCACCATCTCCTTCACCTGTTCTGGGACATTCTCCTCCACCTCCTCCACGTTCTTCCCCTTCGCCCCATACACCTTCACCACCACCACCACCACCACCACCACCCTCACCGCCGTGCCAAACTCCACCCGCCCCTCTATATCAAGGCCCATTGCCACCTGTCGTTGGACTCCCCTACGCATCGCCTCCACCGCCACCCTTCTATTGATTCTTTTCTGCACCACCAACAACACTCCCTTATCAACCCACCTTGTTACAACACTACCGCAACCTTTTCCTAA 1569 0.5194 MMKKKKKKKKVYSSNVTLVIALFVIGGTLNSQSQTACASGLGERGENESIDASLVFENERLRNAFIALQAWKQAILSDPRNQTSDWVGSKVCSYNGVYCAPALDNPNIRTVAGIDLNHGDIAGYLPQELGLLVDLALFHINSNRFCGNVPHNFHSLILLYELDLSNNRFAGKFPEVVLRLPSLKFLDLRFNEFEGAVPRELFDKDLDAIFINDNRFVLDIPDNLGNSPVSVLVLANNRFQGCIPASLGNMSKLNEIIFMNNQFRSCLPSEIGLLKNLTVFDVSFNQLLGPLPNAIGNSVSLEQLNVAHNLLSSRIPPSICMLPHLHNFTFSFNFFTGEPPACLALPAFDDTVNCLPSRPLQRPPSQCTSFLSNPPVDCNSFKCKPFVPSPSPSPSPATPSPSPSPSGHSPPPIHTPLQPTLHLHLHLPPHHHLLHLFWDILLHLLHVLPLRPIHLHHHHHHHHHPHRRAKLHPPLYIKAHCHLSLDSPTHRLHRHPSIDSFLHHQQHSLINPPCYNTTATFS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00354 522 MobiDBLite consensus disorder prediction 389 415 - -
Pste3g00354 522 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 31 474 - -
Pste3g00354 522 SUPERFAMILY L domain-like 66 347 - -
Pste3g00354 522 Gene3D Ribonuclease Inhibitor 229 354 IPR032675 -
Pste3g00354 522 Pfam Leucine rich repeat N-terminal domain 67 99 IPR013210 -
Pste3g00354 522 Gene3D Ribonuclease Inhibitor 65 228 IPR032675 -
Pste3g00354 522 FunFam Leucine-rich repeat extensin-like protein 1 65 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00354 Pste-Chr3 1831421 1832989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00354 41 383 Trihelix Transcription Factor Family AT4G18670 75.219 0.0 535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00354 3 1831421 1832989 Pste3g00354 3 1831421 1832989 ECH