Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00337 CAATCTCCTTGCAAACATTTCAAACACCTTCATTTCTCTTGAAACCTCTTAAATTTTCCTTCACTTCATCATAATTTCTCTTTTCTTGTCCCAAACCAAATTCATATTTTTGACTCAATGGACTCTGAACTCCCTCCTGGCTTCAGGTTTCACCCAACAGATGAGGAACTAATTGTGTATTACCTTTGTAACCAAGCCACATCAAAGCCTTGCCCTGCATCTATCATCCCTGAAGTGGATCTCTACAAGTTTGATCCATGGGAATTGCCAGAAAAAACAGAATTTGGAGAAAATGAATGGTATTTCTTTAGTCCAAGAGACAGGAAGTACCCAAATGGAGTGAGGCCTAACCGAGCAACTGTTTCTGGGTATTGGAAGGCTACAGGCACAGACAAGGCAATCCATAGTGGATCCAAACATGTTGGAGTGAAGAAATCTTTAGTCTTTTACAAGGGTAGGCCACCAAAGGGTTCCAAGACTGATTGGATTATGCATGAGTATAGATTGGCTGAATCAACACAACCAGCTAGCAGGAAAATTGGGTCCATGAGGCTGGATGACTGGGTCTTGTGCAGGATCTACAAGAAGAAGAGCATGGGAAAAGCATTGGAGCACAAAGAGGCACACCAAAAAGTCCAAATTACTAATCTTACAGCTGCAACAAATCATGATGCTGAACAGAAAATGATGAACATTCCAAGGACGTGGTCCCTCACTTACCTTTTGGATATGAATTACTTGGGTCCAATTTTAACTGATGGCTCATATTGCTCAAACTTTGATTTTCAAATTAACAATGCCCACATTGGAATAGACCCTTTTGTAAAATCTCAACCAGTTGAAATAACCAACAATTATGCAGCAGATTCAGTGAAGTTCCAAGTGAAACAAAGTAGCACCATTAACCAGCCCCTATCTATGAAACAGATGTATGATCTTTTTGGAGAAAACCAATAAGAACAAAGAAAAGTCCTTGAATTGTTGTCTAGTCTTGATGATAAGCATAGTCTATATTCTATAGTATAATCATGAAGATTCTATGTAGAAGTATGTCGAATATTATATTAGAAAAATGGATATTCAATGTCTCATTGACACTATTTGTACCTAAGGACAAGTTTAACTACCTCTAGATTAAAGTTCATACTTCTTGAA 1155 0.381 MDSELPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDLYKFDPWELPEKTEFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIHSGSKHVGVKKSLVFYKGRPPKGSKTDWIMHEYRLAESTQPASRKIGSMRLDDWVLCRIYKKKSMGKALEHKEAHQKVQITNLTAATNHDAEQKMMNIPRTWSLTYLLDMNYLGPILTDGSYCSNFDFQINNAHIGIDPFVKSQPVEITNNYAADSVKFQVKQSSTINQPLSMKQMYDLFGENQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00337 279 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Pste3g00337 279 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 219 - -
Pste3g00337 279 ProSiteProfiles NAC domain profile. 5 157 IPR003441 GO:0003677|GO:0006355
Pste3g00337 279 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Pste3g00337 279 FunFam NAC transcription factor 14 161 - -
Pste3g00337 279 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00337 Pste-Chr3 1702626 1704800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00337 3 229 NAC Transcription Factor Family AT1G69490 65.401 8.80e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste3g00337 NAM 3.8e-40 No_clan