Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00308 ATGCTTTCCATGGTGGAGGTTGAGGAGGCGGAGGAGTGGGCGGAGGTGCGGCCGAAGAAGGTCCCCTACGGCGACGTATTCGAGGCGTCCCGCGCCGGCGACGTGGAGCGACTGCGGTACCTTCTGGAGGCGGGCGTGAACGTGAACGCGCGCGACCAGTGGGACTCGGTGGCGCTCTACTACGCCTGCCTCGCCGGTCACCTTGACGCCGCCCGCATGCTCCTCGAAAACGGCGCCATCTGCTCCGAACACACCTTCGACGGCGACCGCTGCCACTACGCCGCCCTCAATTTAAAGGCGGTTGGCATAGCTGAGAAGAGATTGGGTATTTCATCCACTCAGGGATCCATTTGCAGCTACTTCCCTCCAGATGTAGTTTTTATTGTACAAGGAAAACCTATTCAAGCTCACAGAGTCATATTAAGTGCAAGGTCACCATTTTTCAAGAAGAAGTTTACAACTGATTGGAAGGAGCGAAGTGAAGTAAGATTCTCAAGGGAAAGGTTGTCATATCCTGCACTTTACAGCCTCATACACTTCTTTTATTCAGACAGATTAGAGGTTGCTGTTGATGACATGGAGGATCTTGTGAGAATCTGCAAAGTATGCAGATGTGATTCACTGCATAAAGTTCTTGAGAAAGAAGTGATTCATCAAAAATATGCAGAGTATAAAGCACTGAGAGATGTAGATAGTTCTCAGAAACGGTATATTTTACAAGGTCTATCCCTTCCTGAAGAAGACAGGCTTCCTGCAGCCTTGCATCGAATCCTTCTGACTGCCCTTTCGAATTCAACCTGTGAAAGTGGTCAGGATGATGAAATTGATATATTGGTATCTAGGATGGATGCCATGCAGATGACTAAATCTCTGGACGATCTAGCTGATGTTTGTGTAAAAGTTGATAGAAAAATTTTCCGCTGTCACCAAATTATTGTAGCATCTAGGTCAGAATATTTCAAAGCAAGATTATCACATATGAAGGACTTCCATGAAGGGGAAGATAAGTTATCTGTCGACATCCTTCCTTGCCTTGAAGAACATGACTTGAGCATGGGAGCTTTTGAGAAAATGATTGAGTATATGTACACTGATCGTTTGCAGGATATAAATCCAGATCAGGCTGATGAAATGTTGGATGTTGCGTCTCGATACTTATTGTTTCCTCTTAAGCGGGCAGTGGCTGATGTCTTGGTACAACACTTGGCAATGGTGTCACCTGAAGAACTTTGTCATTGGTTAATACTAGCAGACATGTATGGCGTTTTCAAGATTCGAGAATATTGTCTAGACACCATTGCTTGTAATTTTGAGACATTTGCTGATACGAAAGAATTCCGAGCAATGTTGTTGACTTTGCCTCCACCATCTGGAGACTCAAGTCTTCGTACCACTGTGCCGAGCATTCCTGGATCTGCTCTTAATAATGATCACGGAAATCTTCTTGATGATTTACGTGAGAAATGGCTTGAAATTGAAGCTGCTGAGCTTGACAAGAGAGATGAGAGTGCTTTGCAATTTGACAAGCGTCTGGAGATGCTTATGCTTGTTGCAGAGCAAGAAAAATCATCTGACAATGCAGATTCGGATGGTATTACTGACACGCCTGCGTTTCTTCACAATCACCACTCTGATTTATGGTGAACAGAAAGAAATATAAATATAGATTTTGTAGTTCATCACGGGACTAATCCATGATAGGAAGATACTAAATAGGTCACTTGGAGTGCTTAAGTTGGGTTTTTGTAACTTCAGTTGCTCGAGCATTAGTTAATTCTTAAAGTTGTTTGTATAATTACTGATAATTTCAACATTTTGATTGCTATATTAGTTTGTGCATATTGTTAATTGTTGCAACTCAAT 1863 0.4342 MLSMVEVEEAEEWAEVRPKKVPYGDVFEASRAGDVERLRYLLEAGVNVNARDQWDSVALYYACLAGHLDAARMLLENGAICSEHTFDGDRCHYAALNLKAVGIAEKRLGISSTQGSICSYFPPDVVFIVQGKPIQAHRVILSARSPFFKKKFTTDWKERSEVRFSRERLSYPALYSLIHFFYSDRLEVAVDDMEDLVRICKVCRCDSLHKVLEKEVIHQKYAEYKALRDVDSSQKRYILQGLSLPEEDRLPAALHRILLTALSNSTCESGQDDEIDILVSRMDAMQMTKSLDDLADVCVKVDRKIFRCHQIIVASRSEYFKARLSHMKDFHEGEDKLSVDILPCLEEHDLSMGAFEKMIEYMYTDRLQDINPDQADEMLDVASRYLLFPLKRAVADVLVQHLAMVSPEELCHWLILADMYGVFKIREYCLDTIACNFETFADTKEFRAMLLTLPPPSGDSSLRTTVPSIPGSALNNDHGNLLDDLREKWLEIEAAELDKRDESALQFDKRLEMLMLVAEQEKSSDNADSDGITDTPAFLHNHHSDLW 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00308 547 Gene3D - 15 105 IPR036770 -
Pste3g00308 547 Gene3D Potassium Channel Kv1.1; Chain A 278 434 IPR011333 -
Pste3g00308 547 Gene3D Potassium Channel Kv1.1; Chain A 117 216 IPR011333 -
Pste3g00308 547 FunFam BTB/POZ domain-containing protein 117 239 - -
Pste3g00308 547 SUPERFAMILY Ankyrin repeat 28 101 IPR036770 -
Pste3g00308 547 CDD BACK 406 449 - -
Pste3g00308 547 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 15 518 IPR044515 -
Pste3g00308 547 SUPERFAMILY POZ domain 121 215 IPR011333 -
Pste3g00308 547 SMART BTB_4 295 402 IPR000210 GO:0005515
Pste3g00308 547 SMART BTB_4 123 220 IPR000210 GO:0005515
Pste3g00308 547 Pfam BTB/POZ domain 123 219 IPR000210 GO:0005515
Pste3g00308 547 Pfam BTB/POZ domain 291 401 IPR000210 GO:0005515
Pste3g00308 547 ProSiteProfiles Ankyrin repeat profile. 29 53 IPR002110 GO:0005515
Pste3g00308 547 ProSiteProfiles BTB domain profile. 295 371 IPR000210 GO:0005515
Pste3g00308 547 ProSiteProfiles BTB domain profile. 123 190 IPR000210 GO:0005515
Pste3g00308 547 SUPERFAMILY POZ domain 283 402 IPR011333 -
Pste3g00308 547 Pfam Ankyrin repeats (many copies) 28 75 IPR002110 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste3g00308 BTB 3.2e-15 CL0033