Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00307 GTGTTTATCTTAAACCACTGCTACATGCAGCTGAGAACTACCATGCTGTTTTTGCTGAAAATCAAAAAATGTTCAATGAGATTCAAGAATTAAAAGGTGGCCTTATCTGTGTGTTGCTAGTAGGAAATATCAGAGTATATTGTCGAATTAGACCGTTTCTTTCAGGCAAAAAGGATAATCAATCTATTGTTGAACACATGGGTCAAAATGATTTGGTTGTGGCAAATCCATCCAAAGAAGGAAAAGAGGCTCTTCGATCATTTAAATTTAATAAGGTTTTCGACCATACCACAACTCAAGCGGAGGTATACTCAGACATTCAATCCTTGATAAGATCAGTTCTAGATGGGTATAATGTGTGTATATTTGCTTATGGCCAAACTGGTTCAGGGAAAACTTACACAATGACTGGTCCAAATGGGGCAACAAGCGAGACTATTGGTGTTAATTATAGAGCTCTAAATGACCTCTTCGCGATTTCCACAACTAGAGAAAGCTTATTAGACTATGAGATTGGGGTTCAAATGGTAGAGATATATAACGAGCAAGTCCGGGACTTGTTAACAACAGATGTTCCAGATGCTAGCTTGTTCCCTGTGAAAGCACCATCAGATGTTATTAAGCTAATGGACATTGGACTTAAAAATAGAAGTATTGGTGCCACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTGTCTCAATTCATGTTTGTGGGAAGGACTTGAAGACTGGTTCTACTATGGTTGGCAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGGTCTGAAGTAACTGGGGAAAGACTTAAGGAAGCACAACATATAAACAAATCCTTATCTGCCCTGGGAGATGTTATTTTTGCCCTTTCTCAGAAAAGCCCCCATGTACCATACAGAAACAGCAAGCTTACTCAACTTCTTCAAACTGCTCTAGGTGGTAAAGCAAAGACACTCATGTTTATCCAAATTAATTCAGATGTATGTTCATATTCTGAAACTCTGAGCACTCTAAAGTTTGCTGAGAGGGTTTCTGGAATTGAATTAGGAGCTGCACGAAGTAGCAAAGAGGGCAAGGATGTCAAAGAATTAATGGAT 1112 0.3894 MFNEIQELKGGLICVLLVGNIRVYCRIRPFLSGKKDNQSIVEHMGQNDLVVANPSKEGKEALRSFKFNKVFDHTTTQAEVYSDIQSLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSETIGVNYRALNDLFAISTTRESLLDYEIGVQMVEIYNEQVRDLLTTDVPDASLFPVKAPSDVIKLMDIGLKNRSIGATAMNERSSRSHSVVSIHVCGKDLKTGSTMVGNLHLVDLAGSERVDRSEVTGERLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTALGGKAKTLMFIQINSDVCSYSETLSTLKFAERVSGIELGAARSSKEGKDVKELMD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00307 348 ProSiteProfiles Kinesin motor domain profile. 20 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste3g00307 348 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 1 331 - -
Pste3g00307 348 Gene3D Kinesin motor domain 17 348 IPR036961 -
Pste3g00307 348 SMART kinesin_4 18 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste3g00307 348 Pfam Kinesin motor domain 26 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste3g00307 348 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 348 IPR027640 GO:0003777|GO:0007018
Pste3g00307 348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 336 IPR027417 -
Pste3g00307 348 PRINTS Kinesin heavy chain signature 199 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste3g00307 348 PRINTS Kinesin heavy chain signature 94 115 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste3g00307 348 PRINTS Kinesin heavy chain signature 230 248 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste3g00307 348 PRINTS Kinesin heavy chain signature 279 300 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00307 Pste-Chr3 1511070 1512753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00307 2 347 Calmodulin-binding Proteins AT5G65930 38.211 2.82e-68 230