Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00283 GGCCAATTTGCTTTGTAACTCTTGTTTCTCCCTTGACTCCGTTTAAGTCCTGCATATATATGCATAGTGTTTATAGTTTTAGTGAGTGAGAATAGCGATGTCTACTTCAAAGAGGGTCAGCAGTTCTAGTGAAGATGACAATGAACTTAGAAGAGGGCCTTGGACTCTTGAAGAGGATAATTTGCTCTCCCAATACATTTCTAATCACGGGGAAGGGCGATGGAATTTGCTGGCTAAACGTTCAGGATTAAAGAGAACCGGGAAAAGTTGCAGATTAAGATGGCTAAATTATCTAAAACCAGATGTAAAACGGGGAAATTTAACCGCGGAAGAACAACTTTTAATTCTTGAACTCCACTCAAAGTGGGGAAACAGGTGGTCAAAAATAGCACAACATTTGCCTGGCAGAACAGACAACGAAATCAAGAACTATTGGAGAACTAGGATTCAAAAACAAGCAAGACATTTGAAAATTGATACTGACAGCAGAGAGTTTCAAGAACTTGTTAGGCGTTTTTGGATGCCAAGATTGCTTCAAAAAGCAAAAGCCACATATTCTTCAGCCATTTCAGTTCAAAACCAGACAATTCCTATGGCTCTTAATGGTGTTTCTCAGCATTCAAATGTTGGAACCATACCATCACACCCCCCTTGGCAGGAACCTTGCATGAATGAAGCTGCTCCCACTAATATGGACCAAAATGACCAGAACTCAGACTCTGAACACAACAATGGTTCATGCATCTCCTTTTCTGAGTCAGCAAATATTCAAAAATTGCCTCAGCATTTTCGACACGCCATCAACCAATTCAATGCCATAAGTAACAATGACTTTGGCACTTTTACATATGATGGTTATCATGTAAATAATAATGCCTATGAGATGGACACTTTCAAAACACCCACTGCAAGGGTGGTTGAGGATATGCAATACCCAATTGGTGATTGTCAAATGCCAGGAAGCAGTTGGGTAAACAACGATTTTGCATGTAACGTGTGGAACATGGATGAACTGTGGCAATTTAGCAAGTTACAAAAATAAAATATTAGGGTTTTGTTTTTTGGAATAACCCAAACTCTATCTTTGATGATATAATTGCTATCATAAACTGTGGATTAGCACCATATTAATTAATCCAGATGGTGATTGTTTTCTGTACATCTGTCTTGTATTTCCTCTGGTTCGGGGGATTACTTTTGTGATTTGTATTGATTGAGATTTTTTTTTTATACATGCATTGATTGAGATAGAG 1253 0.3831 MSTSKRVSSSSEDDNELRRGPWTLEEDNLLSQYISNHGEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTAEEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRIQKQARHLKIDTDSREFQELVRRFWMPRLLQKAKATYSSAISVQNQTIPMALNGVSQHSNVGTIPSHPPWQEPCMNEAAPTNMDQNDQNSDSEHNNGSCISFSESANIQKLPQHFRHAINQFNAISNNDFGTFTYDGYHVNNNAYEMDTFKTPTARVVEDMQYPIGDCQMPGSSWVNNDFACNVWNMDELWQFSKLQK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00283 314 Gene3D - 76 118 - -
Pste3g00283 314 FunFam MYB transcription factor 75 117 - -
Pste3g00283 314 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Pste3g00283 314 MobiDBLite consensus disorder prediction 194 215 - -
Pste3g00283 314 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Pste3g00283 314 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Pste3g00283 314 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Pste3g00283 314 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 207 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pste3g00283 314 FunFam Myb transcription factor 19 71 - -
Pste3g00283 314 Gene3D - 19 71 - -
Pste3g00283 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Pste3g00283 314 MobiDBLite consensus disorder prediction 192 215 - -
Pste3g00283 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Pste3g00283 314 CDD SANT 76 115 IPR001005 -
Pste3g00283 314 SMART sant 18 68 IPR001005 -
Pste3g00283 314 SMART sant 71 119 IPR001005 -
Pste3g00283 314 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Pste3g00283 314 CDD SANT 21 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00283 Pste-Chr3 1345692 1347348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00283 14 158 MYB Transcription Factor Family AT1G68320 72.414 5.85e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste3g00283 Myb_DNA-binding 9.7e-16 CL0123