Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00280 CCCTAGGGTTTTCATTTCACTTCGTAATCAGTAGGGATTCTTCACTCCTACTCTTAGCCGCAGCTCTTTCAGTGCCTGCAACATCTCCAGCTAAGCAGTGAAGATGTACACATCAAGGAAGAAAATCCACAAGGACAAGGATGTCGAGCCAACTGAGTTTGAAGAGTCAGTTGGACAGGCATTGTTTGATCTGGAAAACACCAACCAGGAGCTTAAAAGTGATCTGAAGGATCTATACATAAATTCAGCAAAGCAAATTGATGTTTCTGGGAATCGCAAGGCTGTTGTTATCCATGTCCCTTACAGATTAAGGAAAGGTTTCCGAAAGATTCATGTTAGGCTTGTTAGAGAACTTGAGAAGAAGTTCAGTGGGAAGGATGTAATTTTGGTTGCCACCCGGAAGATATTGAGGCCACCAAAGAAGGGTTCTGCTGTTCAGCGTCCTCGCAGCCGTACTCTTACTGCTGTTCATGAAGCAATTCTTGAGGATGTTGTATTGCCTGCTGAGATTGTTGGGAAGCGAGTGAGGTATCGAATTGATGGATCCAAGATTATGAAGGTTTACTTGGACCCAAAGGAGCGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTGTACAGGAATCTATCGGGAAAAGATGTTGTATTTGAGTATCCTGTCACAGAGGCTTAGTTTCAATTTTAGCTTTGAATTTGATCTGAGAATTGCATATGGGATATGCTGTTTAAAATTTTGGTGACAAATTGACTTTCAATTTGGAATTCGTTTTCTGATTTTTCAAAGTACTATCTCTGGTTTCTTCAATGTAGCATTTGAGATTTATTTTATAGATTACAAGTCTAAGTCTGTTTGATTTGCAAATCTCAAATTGTCAATCATTTGCATGTAGGCATGTATTGCTTACCCGGGTCACACTGCACCCATTTCTATATTTGGAAAACCAAATTTATAATTGAGGTTTGATTTGTGAAACAACTCG 986 0.3986 MYTSRKKIHKDKDVEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAKQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRKILRPPKKGSAVQRPRSRTLTAVHEAILEDVVLPAEIVGKRVRYRIDGSKIMKVYLDPKERNNTEYKLETFAAVYRNLSGKDVVFEYPVTEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00280 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pste3g00280 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pste3g00280 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pste3g00280 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00280 Pste-Chr3 1320874 1323332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00280 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.581 5.48e-113 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00280 3 1320874 1323332 Pste3g00280 3 1320874 1323332 ECH