Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00269 CTCACAATGAAGCTGGTTACTTGTGAGCCAGTAGCTCTGTCTTTCTGACTGTGTGTGAGAGTGTCTCTTTTGATTAGATAATGATTAGCTAGATAAAGGTTTTTTATTGCTTTTCACACTTTGTCTTGGTCCTGTTTATTTTGCTGCTTTCACCTTTTGCTATGATTTGGTTCCACAGAAATCCACAGCATTCTGTGGAAAATGAGAATATAGAAGTTACTGTTTGTGTAGGGTTTTGAAAGCATCAATGCCACAGAATTGCACAATATATAGTGGTTTTTTTCTTCTCAACAACTCATCTGTTATCTCAAGTTGCTTCTGTTCTCTACCTTCTTTCACCTTCCACAAAGCATAGAGTGGAGGATCTGCTTTTACCTTCTTTTGTTCCCATCAATGAAGAGGCTCAATAACTTGGATACTATGGCTACTTCACTTTCCATGTGCCCATCAAAAGGTGTCAATGAGAGGAAAGAAAGGCAGGGTTATAGTGAAGAATTTCAGGCAATGTTAGATAGATTAGACCAAGAAGACAGCTATGAAGATGGTAGCTTAGTGTTGGAGAAAAAAAGGAGACTGAGTTTTGATCAGGTGAAAGCCTTAGAGAGAAGCTTTGAGCTAGACAACAAGCTAGAACCAGAACGCAAATCAAAGCTAGCAGAAGCACTAGGCCTTGAACCGAGACAGGTTGCTATTTGGTTCCAAAATCGTCGAGCACGTTGGAAAACCAAGCAATTGGAGCGAGACTATAGCATTCTCAGGTCCAATTATGATGTTCTCAAGGTTGAGTACAATAATCTTGAGCAAGAGAATGAGACTCTCACTATTCAGGTTAGAGACAGAGGAGCATCAGAGAGCAATTCAAATGGTGTGGTTAAGGAAGAAAGCAATGTTGATTCTCCTCTCTGTGTGAGTGGATCTTTGCCCAGTTCAAGTTCAGTCATAAACTGGCTTCAATACTCTGATTCAAGAGGATCTCCTGATAAAATGTTTCAGACTCAGTTTATGAGAATGGAGGAGCAGAATTTCTTTAATGTCAATGAGTTTTGTTTCTTTTCAGTTGATCAATCCCCTACCTTGTAACAATACATTGAATATATAATGGGATCATTATTCAGAAGAGCAATGTCATAGCTCAGAGTTCATTGTAATCGACTCC 1156 0.3919 MKRLNNLDTMATSLSMCPSKGVNERKERQGYSEEFQAMLDRLDQEDSYEDGSLVLEKKRRLSFDQVKALERSFELDNKLEPERKSKLAEALGLEPRQVAIWFQNRRARWKTKQLERDYSILRSNYDVLKVEYNNLEQENETLTIQVRDRGASESNSNGVVKEESNVDSPLCVSGSLPSSSSVINWLQYSDSRGSPDKMFQTQFMRMEEQNFFNVNEFCFFSVDQSPTL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00269 228 PRINTS Lambda-repressor HTH signature 92 108 IPR000047 GO:0003677
Pste3g00269 228 PRINTS Lambda-repressor HTH signature 83 92 IPR000047 GO:0003677
Pste3g00269 228 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Pste3g00269 228 Coils Coil 118 145 - -
Pste3g00269 228 CDD homeodomain 57 113 IPR001356 GO:0003677
Pste3g00269 228 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 41 164 IPR045224 GO:0003700
Pste3g00269 228 Pfam Homeobox associated leucine zipper 112 147 IPR003106 GO:0006355|GO:0043565
Pste3g00269 228 SUPERFAMILY Homeodomain-like 57 124 IPR009057 -
Pste3g00269 228 SMART HOX_1 55 116 IPR001356 GO:0003677
Pste3g00269 228 FunFam homeobox-leucine zipper protein ATHB-6-like 60 106 - -
Pste3g00269 228 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Pste3g00269 228 Gene3D - 51 119 - -
Pste3g00269 228 Pfam Homeodomain 57 110 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00269 Pste-Chr3 1208480 1210735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00269 1 146 Homeobox Transcription Factor Family AT2G22430 52.000 1.57e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste3g00269 Homeodomain 2e-16 CL0123