Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00243 ATGTTTCCTTCACAAAGATCCATTCTCATTCCACCATTACCCCCATCCACTGGTCTTAATCCCAACAACAATTTCCACCCTTTTGAAGATCACATGAACTTTCCTACCCAAAACCCTTTTGTCATGGAGGATCCTTTCGACCCCATCACCAACCTCTTCAATATGGGACAAACCCATTATTTGGAAGAAGGGTCTTCTGCACTAGGGTTTGCTAATGTTCACTCTCGAGTAGGGTTATCACCCAACTACAACAATGAGGCAGAGCAAACAATGGTTAATTCTTTAATGACACCTCTTCCTAATGAGTATGGATATAACTGTGAGATTGATGAGAGCAACCAACTGAGTGAAAAGTATCACAACATTGAGAAAGACAACACAAAATGCCAATGGACTCCAGGAGAGGATAGTGCTCTTGTGGAGTTGATAAACCAATTTGGCCTAAAACAATGGGCACAAATTGCAAAGTCACTGCATGGAAGGAGTGGGAAGCAGTGTCGAGAAAGATGGCTCAACCACCTCCAGCCAAATATTACGAAGGGTCCCTGGACCTTGGAGGAAGACATGATTCTTATCAGAGCCCACCAAGAACTCGGAAACAAATGGTCTGAGATTGCAAAGTGGTTGCCTGGTAGGGCTGAGAACACCATCAAGAACCATTGGAACTCCACTAAGCGGCGCCTTAATTGTAAGAGACATAATAGGAGCAAGCATGGTACATATGAAGGGTCATTACTAGGTGCCTATATCAAATGGCTCACAACAACCAAAGAATCCACAGAACTACTCGAGCCTGAGCAAGAAGAATAA 810 0.4358 MFPSQRSILIPPLPPSTGLNPNNNFHPFEDHMNFPTQNPFVMEDPFDPITNLFNMGQTHYLEEGSSALGFANVHSRVGLSPNYNNEAEQTMVNSLMTPLPNEYGYNCEIDESNQLSEKYHNIEKDNTKCQWTPGEDSALVELINQFGLKQWAQIAKSLHGRSGKQCRERWLNHLQPNITKGPWTLEEDMILIRAHQELGNKWSEIAKWLPGRAENTIKNHWNSTKRRLNCKRHNRSKHGTYEGSLLGAYIKWLTTTKESTELLEPEQEE 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00243 269 CDD SANT 182 225 IPR001005 -
Pste3g00243 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 178 IPR017930 -
Pste3g00243 269 ProSiteProfiles Myb-like domain profile. 175 225 IPR001005 -
Pste3g00243 269 Pfam Myb-like DNA-binding domain 131 188 - -
Pste3g00243 269 Gene3D - 128 179 - -
Pste3g00243 269 PANTHER MYB PROTEIN-RELATED 128 238 - -
Pste3g00243 269 CDD SANT 131 174 IPR001005 -
Pste3g00243 269 MobiDBLite consensus disorder prediction 1 26 - -
Pste3g00243 269 FunFam Transcriptional activator Myb isoform A 127 179 - -
Pste3g00243 269 SMART sant 179 227 IPR001005 -
Pste3g00243 269 SMART sant 127 176 IPR001005 -
Pste3g00243 269 Gene3D - 182 242 - -
Pste3g00243 269 ProSiteProfiles Myb-like domain profile. 123 174 IPR001005 -
Pste3g00243 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 180 229 IPR017930 -
Pste3g00243 269 SUPERFAMILY Homeodomain-like 127 221 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00243 Pste-Chr3 1062777 1065465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00243 127 253 MYB Transcription Factor Family AT4G18770 58.268 7.59e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste3g00243 Myb_DNA-bind_6 1.9e-16 CL0123