Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00241 AATTATTCTATCTCATCCATTATCACAAAGAGAGATGGTGCTGACTCTACTGGTAGTAACTCTTTAAGAGCGCTGGCATTAATTGGAGCTGGTGTCTCAGGGTTGTTAAGTTTTTCAACAACTGCATTTGCTGATGAAGCTGAGCAAGGCCTGGCCTGTCCAAACTATCCATGGCCTCACAAAGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACAGAAGTCTGTGCTTCTTGTCATTCTATGTCTTTGATATCATACCGTGATCTAGTTGGTGTTGCTTATACAGAAGATGAAGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGTCCTAATGATGAGGGTGAGATGTTTAACCGCCCTGGTAAACTCAGTGACCGCTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTACTAAAGCGCGTCACAGTGGTCAGAATTATGTCTTTGCACTTCTAACTGGTTATCGTGATCCTCCAGCTGGCGTTACCATTAGAGAAGGACTGCACTACAACCCTTATTTTCCTGGTGGGGCCATTGCTATGCCTAAAATGCTTAATGATGGTGCTGTTGAATACGAAGATGGTACCCCTGCTACAGAAGCTCAGATGGGTAAAGATGTTGTGTCATTCCTGAGTTGGGCTGCAGAACCCGAGATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTTGTTCTATCACTGGCATTACTTCAAGCCGCCTACTACCGCCGTCTACGGTGGTCCGTTCTAAAGTCTCGCAAGCTG 843 0.4472 NYSISSIITKRDGADSTGSNSLRALALIGAGVSGLLSFSTTAFADEAEQGLACPNYPWPHKGILSSYDHASIRRGHQVYTEVCASCHSMSLISYRDLVGVAYTEDEVKAMAAEIEVVDGPNDEGEMFNRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHSGQNYVFALLTGYRDPPAGVTIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00241 281 FunFam Cytochrome c1, heme protein 47 242 - -
Pste3g00241 281 PRINTS Cytochrome C1 signature 242 257 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 PRINTS Cytochrome C1 signature 121 141 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 PRINTS Cytochrome C1 signature 223 242 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 PRINTS Cytochrome C1 signature 203 222 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 PRINTS Cytochrome C1 signature 76 95 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 PRINTS Cytochrome C1 signature 56 75 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 PRINTS Cytochrome C1 signature 154 178 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 PRINTS Cytochrome C1 signature 192 203 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 Gene3D - 47 242 IPR036909 GO:0009055|GO:0020037
Pste3g00241 281 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 242 281 IPR021157 -
Pste3g00241 281 Gene3D - 243 281 - -
Pste3g00241 281 Pfam Cytochrome C1 family 58 274 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 ProSiteProfiles Cytochrome c family profile. 70 177 IPR009056 GO:0009055|GO:0020037
Pste3g00241 281 FunFam Cytochrome c1, heme protein, mitochondrial 243 281 - -
Pste3g00241 281 PANTHER CYTOCHROME C1 14 281 IPR002326 GO:0009055|GO:0020037
Pste3g00241 281 SUPERFAMILY Cytochrome c 51 241 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00241 Pste-Chr3 1052805 1057575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00241 4 281 Chloroplast and Mitochondria Gene Families AT3G27240 85.252 6.04e-166 460