Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00226 CAAGCTTAGAGATATATAATTTCCATATGGGCAAGCTCCTTTTCAACTGTTTCATTGGTTACTGTCTTCTTTATTCTCTATTGTCTGTGCATGGCAAACAATTGTCATGCAACGAAACCCCGTATCCCGGTGTATGCAAGCATTACATTGACACTACAAACACATTATCAACCCTTGATGCTTCCTCTTCTTCCTTCCATGATATGGCCCTTAGGGTCACCATGGAGCAGGCAATGCAGGCTTATAAACTTGTCTCGAGCATGGACTTGAATAATTTCAAGGACAAGCGAGGCAAGTCTGCATGGGAAGATTGTTTGGAGCTCTATGAAAACACACTTTATCAGCTCAAACGCTCAATGAACTCGAACAATCTAAATGATAGGTTGACTTGGCAAAGTGCAGCTATTGCAAACCAGCAAACATGCCAAAATGGTTTCACAGAATTCAACCTTCCCTCTCACCTAAACCAATTCCCCTCCATGTTAAGCAACTTCTCCAAATTGCTGAGCAACTCCTTGTCCGTTAGCAAGGCTATGGCGAGTTTGACATCGACCAAACAAATTTATGGGCGAAGGCTGCTTTCAGATGACTTCCCCTATTGGCTGTCACGTTCAGATAGAAGACTCTTGCAGGAAACATCATCAAAAGCTGATGTTGTGGTGGCACAGGATGGGAGTGGGAACTATAAGACTATCTCAGAGGGTGTGGCTGCAGCTTCTAGACTCACTGGGAAAGGTCGTGTCGTTGTGCACGTCAAAGCTGGCGTTTACAAAGAAAATGTTGATATCAAGAGGACAGTCAAGAACTTAATGATCATCGGAGATGGCATGGGTGCTACTATTGTTACTGGTAACCGCAACGCACAAGATGGCTCCACTACTTTTCGTTCTGCTACTTTTGCGGTTGATGGTGATGGGTTCATAGCTCGGGACATAAGCTTCGAAAACAGCGCAGGACCACAGAAGCACCAAGCGGTGGCTCTCCGATCGGGGGCGGACAACTCAGTGTTCTATAGGTGCAGCTTTAAGGGATACCAAGACACCTTATACGTATACGCGAACAGGCAGTTCTACAGAGAGTGTGACATATACGGAACGGTAGACTTCATATTTGGGGACGCAGTGTCGGTGCTTCAAAGCTGCAACATCTATGTGAGGAGACCAATGGGCAACCAGCTTAACACGGTGACGGCACAAGGAAGAACGGACCCTAACGAGAACACAGGAATAATCATCCATAACTGTCGTATTACTGCTGCCGGTGACCTCAAAGCAGTGCAGGCCTCTTTTAGAACCTATCTAGGTCGTCCATGGCAAAAGTACTCCAGGACTGTTGTCATGAAGACTGCCCTTGATGCCTTGATTCACCCTGCAGGTTGGTTTCCATGGAGTGGAAACTTTGGTCTGAGCACCCTATTTTACGCAGAACATGGGAACACAGGAGCGGGTGCTAGCACAGAAGGGAGGGTGAAATGGGGAGGGTTCCGTCTTATCTCCAGTTCCGAGGCTGTCAAATTCACCGTTGGGAATTTCTTGGCTGGCGACGCCTGGATACCTGGTAGCGGCGTGCCGTTTGATGCAGATGCTGTTGTAAATCAAACGTACCCTAATGTTACTGCTTCCATCGCCCCTTCACCCAGGACAACCCATCCATCAACAATTAATTTCCTGCATTCCATTAAA 1682 0.4685 MGKLLFNCFIGYCLLYSLLSVHGKQLSCNETPYPGVCKHYIDTTNTLSTLDASSSSFHDMALRVTMEQAMQAYKLVSSMDLNNFKDKRGKSAWEDCLELYENTLYQLKRSMNSNNLNDRLTWQSAAIANQQTCQNGFTEFNLPSHLNQFPSMLSNFSKLLSNSLSVSKAMASLTSTKQIYGRRLLSDDFPYWLSRSDRRLLQETSSKADVVVAQDGSGNYKTISEGVAAASRLTGKGRVVVHVKAGVYKENVDIKRTVKNLMIIGDGMGATIVTGNRNAQDGSTTFRSATFAVDGDGFIARDISFENSAGPQKHQAVALRSGADNSVFYRCSFKGYQDTLYVYANRQFYRECDIYGTVDFIFGDAVSVLQSCNIYVRRPMGNQLNTVTAQGRTDPNENTGIIIHNCRITAAGDLKAVQASFRTYLGRPWQKYSRTVVMKTALDALIHPAGWFPWSGNFGLSTLFYAEHGNTGAGASTEGRVKWGGFRLISSSEAVKFTVGNFLAGDAWIPGSGVPFDADAVVNQTYPNVTASIAPSPRTTHPSTINFLHSIK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00226 552 ProSitePatterns Pectinesterase signature 1. 235 254 IPR018040 -
Pste3g00226 552 Gene3D - 203 520 IPR012334 -
Pste3g00226 552 FunFam Pectinesterase 25 170 - -
Pste3g00226 552 FunFam Pectinesterase 203 520 - -
Pste3g00226 552 NCBIfam pectinesterase inhibitor domain 27 170 IPR006501 GO:0004857
Pste3g00226 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 170 IPR035513 -
Pste3g00226 552 Pfam Plant invertase/pectin methylesterase inhibitor 27 165 IPR006501 GO:0004857
Pste3g00226 552 PANTHER PECTINESTERASE 24 510 - -
Pste3g00226 552 ProSitePatterns Pectinesterase signature 2. 354 363 IPR033131 -
Pste3g00226 552 SMART PMEI_2 19 166 IPR006501 GO:0004857
Pste3g00226 552 Pfam Pectinesterase 209 506 IPR000070 GO:0030599|GO:0042545
Pste3g00226 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 171 IPR035513 -
Pste3g00226 552 SUPERFAMILY Pectin lyase-like 206 517 IPR011050 -
Pste3g00226 552 CDD PMEI-like_3 26 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00226 Pste-Chr3 1005164 1007719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00226 4 517 Carbohydrate Esterase AT1G23200 51.366 0.0 533