Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00225 AAAACCATATTTTGACATTAACCTGCTCCTCCTTCCTCTTCTTCCTTCTCCACAATAAGCCTCACACACCTTTGTTTCTTTCTCTTCCTCCATTATTGAGCTTCCACTAGTTTTTCTTTCAAGGACTAGCACTCCTTAAAGTCGCAATCTTTAGAACTTTTGGAAGATACCCTCCAAACCATTTTGCAGCCATAACTTGCCTAAGGAGAGGGTTTTGGTTTCAAGTTGCAACCATTTCTGCTTTTACCTTCAAAAGGGTCATAGATGATAGCCAGCTCCTTCTGCAATGGTGATTCTATGTTTTCAAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGAACATAAAAGGAGTCCCTGCTCTGTTGACCAAAGCAGTTATACTTCTATTGCTTCCAAAAGGCAAAAGGCTGATTTATCGATCAGCACTAAGGAGAGGAAGGAGAAGATTGGAGAACGAATTGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACTGATACCTCTTCTGTTCTAAAGGAGGCGATGGAATATATAGGATTCCTTCATAAACAAGTTAAGGTTTGGCCATTCTTGCTACATTATGCTGGAATTGTCTTCCTAAATATTCTTGTAATTGGTTTCATATACCACAAGTATACGCACTTGCACCTAAATTATCTTCTCAGTGCTCCATACCTTGAAAATTCACCAGCAGCCAAGATGCAGGGTATGGAGCCATGCAGCCTGAGGAGTAGAGGGCTATGCCTTGTTCCTGTGTCATTTACAATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATTAAAACTACCACCACTCCTAAAATGGAGAAAGATGTCTCTCAATTTCATTGACAAATTTTCTTATCTTTGCAGCCTAAAAGGTTGCCAAGTTGCTAAACCAGTCTAGTAGCATGAAGATTTATCATCATACATCTAGATGGAATCATAGTAGCTATAAAATAGTTAAAGCATTAAAAACTCTAATCAAAAAGCTGTCTCACACCTTTAAGATTTTAAACGGGTGATTGAGGCTAAGCTTCCAAATATGTGTCCTTAATTCCATGTGCTGATTATTAAGTGTATATTTGAAAATTCTAGTTTATAATGATTCCATGTACTGATTAGCTTAATGAAAGTCGTTTCTAGATTGATGGAAG 1172 0.3857 MIASSFCNGDSMFSREEGIDVRKMMEHKRSPCSVDQSSYTSIASKRQKADLSISTKERKEKIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKVWPFLLHYAGIVFLNILVIGFIYHKYTHLHLNYLLSAPYLENSPAAKMQGMEPCSLRSRGLCLVPVSFTIGVAESNGADIWAPIKTTTTPKMEKDVSQFH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00225 200 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 169 - -
Pste3g00225 200 FunFam Transcription factor bHLH113 family 45 105 - -
Pste3g00225 200 CDD bHLH_AtbHLH_like 52 101 IPR045239 -
Pste3g00225 200 Gene3D - 43 102 IPR036638 GO:0046983
Pste3g00225 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 104 IPR036638 GO:0046983
Pste3g00225 200 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Pste3g00225 200 SMART finulus 52 101 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00225 Pste-Chr3 1004820 1009661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00225 24 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 53.529 5.19e-54 168