Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00196 ATGCTATCTTCAAATGTTGTTCCATCATCAACCCATGTTACTTTTACCAAACCCAATCACCATTTCCTCATCAATGCATCTCCCAATCTCAAACCAAATCTTCTGAGAAGGTTTCGGGCCACTCCTCAAAGTTCCAAACTTTCTCTCACTCCAACCTCTCAGATCCAACATTCAATCACAAAGTTAGGCTCTTTCAACAGATTCCTCGCACACCCTTTTGAGTTCTCATCAAAACACAGCCACCAGATCGTTAAGGCTGCATCTGAAGGCAATCCTGAAGGAGAAAATATAGCTGCCAGTGAACCCAAATCTAAGAATCTCAAACTTGCTCTTGTGTTTGGGCTATGGTACTTCCAAAATATTGTGTTCAACATTTACAACAAGAAAGTGTTAAACATATTCCCTTTCCCATGGCTTCTTGCCTCTTTCCAGCTCTTTGTGGGGTCCATTTGGATGCTTGTGCTTTGGTCCTTAAAGCTCCAACCTTGTCCCAAAATCTCAAAGCCCTTCATCATTGCTCTCCTTGGACCTGCTTTGTTCCACACAATAGGCCACATATCAGCCTGTGTGTCATTCTCCAAGGTTGCTGTTTCCTTCACACATGTCATCAAATCTGCTGAACCAGTTTTCTCTGTCATTTTTTCTTCATTCCTTGGTGATAGGTACCCCATTCAGGTTTGGCTCTCCATTTTGCCCATTGTGCTTGGTTGTTCTTTGGCTGCTGTTACTGAGGTGTCTTTCAATATACAAGGATTGTGGAGTGCCCTTATTAGTAATGTTGGTTTTGTGTTGAGGAACATCTACTCTAAGAAAAGTTTACAGAATTTCAAGGAAGTTGATGGCTTAAACTTGTATGGATGGATTACTATTGTTTCACTGCTCTACCTGTTTCCAGTGGCTATTTTTGTAGAAGGGTCTCAATGGATCCCTGGGTATTACAAGGCAATTGAAGCTATAGGCAAATCATCCACATTTTATACCTGGGTGTTGCTATCTGGGGTGTTCTACCATCTATATAACCAATCATCTTACCAAGCATTGGATCAAATTAGCCCATTGAGTTTCTCTGTGGGAAACACAATGAAAAGAGTGGTGGTGATTGTATCTTCAGTTTTGGTGTTCAGAAATCCGGTTAGACCTCTTAATGGCCTTGGATCTGCCATTGCTATTCTTGGGACTTTCCTTTATTCACAGGCAACATCCAAAAAGAAAGCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1245 0.4112 MLSSNVVPSSTHVTFTKPNHHFLINASPNLKPNLLRRFRATPQSSKLSLTPTSQIQHSITKLGSFNRFLAHPFEFSSKHSHQIVKAASEGNPEGENIAASEPKSKNLKLALVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFVGSIWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSFLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNIQGLWSALISNVGFVLRNIYSKKSLQNFKEVDGLNLYGWITIVSLLYLFPVAIFVEGSQWIPGYYKAIEAIGKSSTFYTWVLLSGVFYHLYNQSSYQALDQISPLSFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATSKKKAKKIEGEKSS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00196 414 Pfam Triose-phosphate Transporter family 107 397 IPR004853 -
Pste3g00196 414 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 407 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pste3g00196 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 399 - -
Pste3g00196 414 PANTHER SOLUTE CARRIER FAMILY 35 108 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00196 Pste-Chr3 844477 845721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00196 24 412 Antiporters AT5G17630 67.933 0.0 541