Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00147 ATGTGGTGCCTATTATGTGTTAAGAACCCTCTCATAGGTGAAAACGAAACTTTGGGAATAGCAATTTACGTGAATTTAAAGCACCGTATTCTGATTCCTATTCGTAAAAGCTCAGGTGTGGTTGAAGCTTCCTTTTTTGGGATTCGTAACCGTGCAAGTTCTGCAGTAGCAGATTCCAAGAACATTGGTGCTGCTAACAGCGACGATGCCTTCTACAGGTATAAGATGCCTAGAATGATTACCAAAATTGAGGGAAGAGGTAATGGCATCAAAACTAATGTTGTCAATATGGTTGATATTGCAAAGGCTTTGGCAAGGCCTGCGTCTTACACAACTAAGTATTTTGGTTGTGAACTTGGGGCGCAGTCTAAGTTTGATGAGAAGACTGGCACCTCTCACGTCAATGGAGCACATGATACTGCTAAGCTTGCTGGCCTTCTTGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAACCCTGAAACGGAGATCCTAATTACTAAGAACCAAATGATCCAACTGAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTTGATATGAGAGACAAGCTAACTACCTTCATAGTTAAGAACCCTCCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAAAGATTGAAAGAAGGTGAAATGGCTGATGAGGAACAGAAGAAAGGGAAGAAAGAGGTTAAGAAGAAAGGCTCTTCAAAGGATGCCACTGCTAAATCCACCACTTCAAAGAAAAAGCCAAGCGGTTCTGATGAAGACCGTACATCACCTACTCACAGTCAGATTGATGAGAAAGAAGAGGAGGCTCTAGATGAAGATGATGGTGATGATGATGTGCAATGGCTGACAGATACATCTCTTGATGCTGCTCGGCAGCGGATCCAAGAACAGTTGAGTGCTGTCACAGCTGATATGGTTATGCTTTCTACAGATGAACCAGAGAAGAAGAAAAAAGCCGCAAGTAATGGAAAGGGGGGTTCCCCGAATGGTAACTCCAAGCCCTATGCAACCCTGGTTGGTGAAGTGAAAGCATATTTGAAGAAAGGTGTTGGGGCAAATGAATTGCTGGCCCATCTTGCAGCACTTCCCTCTCCTGCTCAAGAAAAGATGAATGCTCTGGTTGAAGCTCTATTCGATGGAACCGAAAAAGGTTTTGGTAAAGAAGCTGATAAGAGGAAGAGCTACTTTGCTGCTGCTGTTACTGAGGAGGGATCCCAGATGTTATTGCTTCATGCTATTGAGGAATTTTCTTGCAAGCCTTGTTCCAATGCTTTGAAGGAGGTTGCCTTGGTTCTGAAGGCTCTCTATGATGCTGATGTGTTAGAGGAAGAGCACATAGTGCAGTGGTATCAAAATGGACTGAAGGTGACAACAAGAACTCTAAGATTTGGAAGAATGCTCAACTTTTCGTTGAATGGCTTCAGAATGCTGAATCAGAATCTGAGGAAGAATAATTTTCCCACATCATCCGTTTATGTTTCTACTTGCTTCCTGTCATTTCCTTTGTTTTCCAACAATGACTGA 1563 0.4267 MWCLLCVKNPLIGENETLGIAIYVNLKHRILIPIRKSSGVVEASFFGIRNRASSAVADSKNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEMADEEQKKGKKEVKKKGSSKDATAKSTTSKKKPSGSDEDRTSPTHSQIDEKEEEALDEDDGDDDVQWLTDTSLDAARQRIQEQLSAVTADMVMLSTDEPEKKKKAASNGKGGSPNGNSKPYATLVGEVKAYLKKGVGANELLAHLAALPSPAQEKMNALVEALFDGTEKGFGKEADKRKSYFAAAVTEEGSQMLLLHAIEEFSCKPCSNALKEVALVLKALYDADVLEEEHIVQWYQNGLKVTTRTLRFGRMLNFSLNGFRMLNQNLRKNNFPTSSVYVSTCFLSFPLFSNND 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00147 520 SMART 542_3 406 481 IPR003307 GO:0005515
Pste3g00147 520 MobiDBLite consensus disorder prediction 204 278 - -
Pste3g00147 520 SMART eIF2Bneu4 71 185 IPR002735 GO:0003743|GO:0006413
Pste3g00147 520 ProSiteProfiles W2 domain profile. 338 520 IPR003307 GO:0005515
Pste3g00147 520 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 60 489 IPR045196 GO:0003743|GO:0006413
Pste3g00147 520 SUPERFAMILY ARM repeat 345 466 IPR016024 -
Pste3g00147 520 Gene3D - 161 201 - -
Pste3g00147 520 CDD W2_eIF5 345 468 - -
Pste3g00147 520 Pfam Domain found in IF2B/IF5 67 183 IPR002735 GO:0003743|GO:0006413
Pste3g00147 520 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 67 157 IPR016189 GO:0003743|GO:0006413
Pste3g00147 520 FunFam Eukaryotic translation initiation factor 5 156 201 - -
Pste3g00147 520 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 154 189 IPR016190 GO:0003743|GO:0006413
Pste3g00147 520 MobiDBLite consensus disorder prediction 324 347 - -
Pste3g00147 520 FunFam Eukaryotic translation initiation factor 5 57 160 - -
Pste3g00147 520 Gene3D - 345 475 - -
Pste3g00147 520 MobiDBLite consensus disorder prediction 279 293 - -
Pste3g00147 520 MobiDBLite consensus disorder prediction 203 293 - -
Pste3g00147 520 Gene3D - 52 160 - -
Pste3g00147 520 Pfam eIF4-gamma/eIF5/eIF2-epsilon 419 468 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00147 Pste-Chr3 633549 635729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00147 60 467 Eukaryotic Initiation Factors Gene Family AT1G77840 62.802 6.51e-163 468