Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00140 ATGGGCAATGGCCGTGCATCTTCTTGGTTAAGGAATAATTCAAATAAATTCTACGTTCACAAACAAACTAAAGTAGCAAGGATGAGTGACATGGTAAACAACCACAAAAGCAGCCACTCCCACTCCCTCTCCCAACTTGGGGGCATCAAAGAACTTGCGACGCTTCTTGAAACCGACATCAACCGTGGCATCCCCGACAACAAGGATCATATTGATAAGCGAAAACGTGCGTTCGGTGTCAACATGTTCAGCAAACCTCCACCCAAACCTTTTCATTGTTTTGTCCTTGAATCTTTTCAAGATACCACTATCATCATCCTTTTGCTGTGTGCTCTGCTTTCTCTTGCCTTTGGCATGAAGCAACATGGCTGGAAGGAGGGATGGTACGATGGAGGCAGCATAATTTTGGCGGTTATTCTCGTTGTTGTTGTCTCTTCTGTCAGCAACTTTAACCAATCTAGACAGTTCCGCAAAGTGTCTGGCAAGAGTAGCAACATAGGAGTGGAAGTGGTGCGAGGTGGTAGACGCCAAAGCGTGTCAATCTTTGACGTGGTGGTGGGCGACATTGTGTACTTGAAGATTGGTGATCAGGTTCCGGCTGATGGGGTGTTTTTGGAGGGGCATTCCTTGAAGGTTGACGAATCTAGCATGACCGGTGAGAGTGACCACGTTCATGTGAATGCTGAGACCAACCCTTTCTTGCTATCTGGCACCAAGGTCACTGATGGTTTTGCACACATGCTTGTTACTTCTGTGGGTACCAACACTGCTTGGGGAACCATGATGGGATCCATTGCAACACACCCTCATCAAGACACCCCTTTGCAAACACGTCTCACTCAGTTGACTTCTTCCATTGCCAAGCTTGGCTTGCTCTTCGCTTCACTTGTTTTGCTTCTCTCTCTCATCCGCTACTTCACCGGAAGCACCATAGATGACTTTGGGAACCCGGAATTCCTTGGTAGAAACACTAAGTTCGATGATGTTATGAATTCCGTTCTTGGAATTGTTGCTGCAGCTGTCACAATTGTCGTGGTGGCAATTCCTGAAGGCTTGCCGCTTGCTGTTACTTTGACCTTGGCTTATTCCATGAAGAAAATGATGAGGGATAATGCAATGGTTAGGAGAATCTCTGCTTGCGAGACAATGGGGTCGGCAACAACTATCTGCACCGATAAAACTGGTACACTTACGTTGAATGAGATGAAGGTTACAGAGATTTGGGTGGGAAAAAGTAAATTACCGGAACATGGGTGTTTGGCACCAAATTTAGTCCAATTATTGAAAGAAGGAATTGGGTTGAATACTACTGGAAGCGTTTACCTGCCCCAACAAACTTCCCTGCCTGAGATTTCCGGGAGTCCAACTGAGAAAGCGTTGCTTTCCTGGGCTGTGCTTTATTTGGGCATGGACATTGATGAAGTGAAGAAGCATTGTGAGATAATACATGTGGAGACCTTCAACTCAATGACAAAGAGAAGTGGGATTCTGATGAGGGAGAAAACAGGAAGTAGCACGATCCGTACTCACTGGAAGGGTGCAGCTGAGATGATATTGCGCATGTGTTCAAATTACTATGACCAAAAAGGGGAAATCATGATCATGAATGATGAAGAAAGGATTCAGATTGAGAGCATTGTCAAGGGCATAGCAACTAAAAGTTTGCGATGCATTGCCATTGCCTTTGCCCAAAAGAGCTTTAAAAGTCAGGACTGCAAAAACATTGAAAAAAAGCTTCAAGAGTCGGAACTAACATTGTTGGGGATACTTGGGTTGAAAGACCCTTGTAGGCCAGGAGTTGAAGCGGCAGTTGAATCCTGTAAGCAAGCTGGAGTGAAGATCAAGATGATAACGGGAGATAACGTGCACACAGCAAGGGTCATAGCCACTGAATGCGGTATTCTTGATCCTTATGAAGAATTGGATGAAGCAGCAGTGGTTGAAGGCTTTCAATTCAGAAATTTCTCACCTGAGGAAAGAATGGATAAGATTGAAAGAATCAGAGTGATGGCCAGATCATCTCCATCTGACAAGCTTCTAATGGTTCAATGTTTAAAGCAGAAGGGTCATGTTGTGGCTGTCACAGGTGATGGCACCAATGATGCACCTGCTCTGAAGGAAGCTGATATTGGACTTTCCATGGGAATACAAGGCACCGAAGTGGCAAAGGAGAGCTCAGACATCGTTATCCTTGATGACAATTTTTCTTCTGTGGTGACAGTACTAAGGTGGGGAAGATGTGTGTACACAAACATCCAGAAGTTCATTCAGTTTCAGCTCACAGTTAACATTGCTGCACTTGTCATCAACTTTGTAGCTGCAGTTTCTTCTGGTAAAGTGCCTCTTACAGCTGTCCAGCTTTTGTGGGTAAATCTGATAATGGATACTCTTGGAGCTTTGGCCTTGGCCACTGAGCAACCCACTAACGATCTCATGAAGATGCCACCTGTAGGTAGAGTTGAGCCACTTATAACTAGAGTTATGTGGAGGAACCTTATTTCACAAGCATTATATCAAGTGCTGGTGTTGCTGATTTTACAATTCAAGGGAAGATCAATCTTTGATGTCAGTGAAAAGGTGAAGAACACCCTTATTTTCAATGCTTTTGTCCTCTGCCAAGTCTTCAACGAGTTCAATGCAAGAAAGCTTGAGAAGAAGGACATCTTTGAGGGGATTGGCAAAAATAAGTTGTTCATAGTAATTGTTGGCCTAACTATAGTTATTCAGCTAGTTATGGTTGAGTTTCTGAACAAGTTTGCCAATACTGAGAGATTGACTTGGGAGCAATGGGGTGTTTGTGTTGGCATTGGAGCTTTGTCTTGGCCAGTTGGTCTGCTGATGAAGTGTATCCCAATTGTTCCCAATAGTAGAAGGTGA 2877 0.4428 MGNGRASSWLRNNSNKFYVHKQTKVARMSDMVNNHKSSHSHSLSQLGGIKELATLLETDINRGIPDNKDHIDKRKRAFGVNMFSKPPPKPFHCFVLESFQDTTIIILLLCALLSLAFGMKQHGWKEGWYDGGSIILAVILVVVVSSVSNFNQSRQFRKVSGKSSNIGVEVVRGGRRQSVSIFDVVVGDIVYLKIGDQVPADGVFLEGHSLKVDESSMTGESDHVHVNAETNPFLLSGTKVTDGFAHMLVTSVGTNTAWGTMMGSIATHPHQDTPLQTRLTQLTSSIAKLGLLFASLVLLLSLIRYFTGSTIDDFGNPEFLGRNTKFDDVMNSVLGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMRDNAMVRRISACETMGSATTICTDKTGTLTLNEMKVTEIWVGKSKLPEHGCLAPNLVQLLKEGIGLNTTGSVYLPQQTSLPEISGSPTEKALLSWAVLYLGMDIDEVKKHCEIIHVETFNSMTKRSGILMREKTGSSTIRTHWKGAAEMILRMCSNYYDQKGEIMIMNDEERIQIESIVKGIATKSLRCIAIAFAQKSFKSQDCKNIEKKLQESELTLLGILGLKDPCRPGVEAAVESCKQAGVKIKMITGDNVHTARVIATECGILDPYEELDEAAVVEGFQFRNFSPEERMDKIERIRVMARSSPSDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRCVYTNIQKFIQFQLTVNIAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMKMPPVGRVEPLITRVMWRNLISQALYQVLVLLILQFKGRSIFDVSEKVKNTLIFNAFVLCQVFNEFNARKLEKKDIFEGIGKNKLFIVIVGLTIVIQLVMVEFLNKFANTERLTWEQWGVCVGIGALSWPVGLLMKCIPIVPNSRR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00140 958 Gene3D - 97 943 - -
Pste3g00140 958 Gene3D - 387 740 IPR023214 -
Pste3g00140 958 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 396 600 IPR023299 GO:0000166
Pste3g00140 958 PRINTS P-type cation-transporting ATPase superfamily signature 719 731 - -
Pste3g00140 958 PRINTS P-type cation-transporting ATPase superfamily signature 390 404 - -
Pste3g00140 958 PRINTS P-type cation-transporting ATPase superfamily signature 695 714 - -
Pste3g00140 958 PRINTS P-type cation-transporting ATPase superfamily signature 588 599 - -
Pste3g00140 958 PRINTS P-type cation-transporting ATPase superfamily signature 610 620 - -
Pste3g00140 958 PRINTS P-type cation-transporting ATPase superfamily signature 213 227 - -
Pste3g00140 958 FunFam Calcium-transporting ATPase 590 740 - -
Pste3g00140 958 Pfam haloacid dehalogenase-like hydrolase 387 709 - -
Pste3g00140 958 Pfam E1-E2 ATPase 168 369 - -
Pste3g00140 958 Gene3D - 400 595 IPR023299 GO:0000166
Pste3g00140 958 Gene3D - 68 266 - -
Pste3g00140 958 PANTHER CATION TRANSPORTING ATPASE 26 952 - -
Pste3g00140 958 Pfam Cation transporting ATPase, C-terminus 780 949 IPR006068 -
Pste3g00140 958 SFLD C1.7: P-type atpase like 372 748 - -
Pste3g00140 958 FunFam Calcium-transporting ATPase 712 954 - -
Pste3g00140 958 SUPERFAMILY Calcium ATPase, transduction domain A 168 264 IPR008250 -
Pste3g00140 958 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 952 IPR023298 -
Pste3g00140 958 FunFam Calcium-transporting ATPase 143 266 - -
Pste3g00140 958 FunFam Calcium-transporting ATPase 400 595 - -
Pste3g00140 958 NCBIfam calcium-translocating P-type ATPase, PMCA-type 25 952 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pste3g00140 958 Pfam Cation transporter/ATPase, N-terminus 47 114 IPR004014 -
Pste3g00140 958 NCBIfam HAD-IC family P-type ATPase 332 417 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g00140 958 NCBIfam HAD-IC family P-type ATPase 666 777 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g00140 958 NCBIfam HAD-IC family P-type ATPase 134 307 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g00140 958 ProSitePatterns E1-E2 ATPases phosphorylation site. 392 398 IPR018303 -
Pste3g00140 958 PRINTS H+-transporting ATPase (proton pump) signature 727 752 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g00140 958 PRINTS H+-transporting ATPase (proton pump) signature 695 711 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g00140 958 PRINTS H+-transporting ATPase (proton pump) signature 543 561 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g00140 958 SFLD p-type atpase 372 748 IPR044492 -
Pste3g00140 958 SUPERFAMILY HAD-like 388 800 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00140 Pste-Chr3 615374 618250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00140 43 952 Primary Pumps ATPases AT3G63380 65.241 0.0 1159