Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00139 ATGGAGTTTGTATCTTTGAGAAAATTGTTTGATGTTGTTGTTACTCCCTTTTGTTTACCATTGAAAGAGTCATGCTTACTTGTTAAACAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAAGTTCAAAGAGGTTACATTGACTCCAACACATTTGGCAATCGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGAGAATATGCAATGCAGGGCGCTTCAGTGAGGATGAGGCACGCTTCTTCTTCCAGCAACTTATATCAGGAGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGCTGGAAAACACGTTGTTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGCTATTCCAAGTCCTCGGTACTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATACATCGCTCCAGAAGTTTTGCTTAAGAAGGAATATGATGGGAAGATTGCGGATGTGTGGTCATGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAACCGAAAAACTTCCGCAAGACAATACATAGAATATTGAATGTTCAGTACTCAATTCCTGACTATGTTCATATATCTGCTGAGTGCCGTCACCTGATATCAAGGATTTTTGTTGCTGATCCTGCAAAGAGAATAAATATTCCTGAGATTAGAAACCACGAGTGGTTTTTGAAGAACCTTCCAAGTGATCTCATGGATGGGAATACCAACAACCAGTTTGAAGAGCCTGATCAGCCTATGCAAAGCATAGAAGAAATCATGCAGATAATTAGGGAGGCTACAATTCCTGCAGCTGGATCTCATTCTCTTAACCATGATCTTACGGGTAGCTTGGATATCGATGAGGACATGGATTCGGATCCTGACCTTGACTTAGATAGCAGTGGAGAAATAGTATATGCTATGTAA 990 0.4081 MEFVSLRKLFDVVVTPFCLPLKESCLLVKQIDENVQREIINHRSLRHPNIVKFKEVTLTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISAECRHLISRIFVADPAKRINIPEIRNHEWFLKNLPSDLMDGNTNNQFEEPDQPMQSIEEIMQIIREATIPAAGSHSLNHDLTGSLDIDEDMDSDPDLDLDSSGEIVYAM 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00139 329 Gene3D Phosphorylase Kinase; domain 1 22 69 - -
Pste3g00139 329 Gene3D Transferase(Phosphotransferase) domain 1 70 258 - -
Pste3g00139 329 SUPERFAMILY Protein kinase-like (PK-like) 28 273 IPR011009 -
Pste3g00139 329 SMART serkin_6 3 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00139 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 109 121 IPR008271 GO:0004672|GO:0006468
Pste3g00139 329 ProSiteProfiles Protein kinase domain profile. 1 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00139 329 FunFam Serine/threonine-protein kinase SRK2E 70 258 - -
Pste3g00139 329 Pfam Protein kinase domain 30 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00139 329 PANTHER SERINE/THREONINE KINASE 27 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00139 Pste-Chr3 613350 616156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00139 33 256 CBL-interacting serine-threonine protein kinases AT5G25110 47.186 3.26e-62 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pste3g00139 Pkinase 3.9e-62 CL0016