Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00129 CGTTGCTTTCTTCTTTCTCTTTCACATTTCCACAGAATCTTCGCGTTCTGAAATTTCCCTTCACATCGAACCCATTTTCCTTTTTCTCTGTTCTTTATTATTCCTCTTCTTCACAACCCCACTCTCTTCTTCTATTTATTCATTCATATTCCTCTGTCTTCTCTTCCTTCCTCTGCATCACACAAAATCTGAATCTGAAGGCTGCGACGATCCAATGGGTTCGGTTCCCTCAGAACTGAGCTTGGATTTAAGACCCACCTTTGTCCCCAAAACCATCACCGATTTCCTCTCTCACCTCTCTTCCCAACCCGACAAGCTTCCCACGCTCCACGATTTCCTCGCCCGTTTGGAAGACGAGCTTCGCAAGATCGACGCTTTCAAACGCGAACTCCCTCTCTCCATGCTCCTCTTAAACGACGGTGCGTTTTACTCACTTTCCCATTTCCCTTCCCTCTTTCTCGCTCCTCCCCTGTTTGCTTCATTTCCTCTCTCTCTCTCTCTCTCTCTCTCTGTTGCAGCAATTTCAGTTCTCAAAGCGGAATCGCACAAATGCAGGCCGCGTGATTCTCCGCCGGTGTTGGAGGAGTTCATTCCCTTGAAGAAAGAGCGTGATCACAGCGGGGATGATGTTGATAATGATAACGATAACGATAACGATAACGATGATGAGAACGAATGCAGGGATAAGAGGAATTGGATGAGTTCGGTTCAGCTTTGGAATAACACTTCAACTAATAACAATGCCTCTGATCGCAAACAGCTTCATAAATTAGAACCCAAGAAAAGTGAAGAGGGGCAATGTGTGGGTGATGATCCTTTTCAGTCATGTAGTAACAGAAATGAAGGGAGGAGGGCGTTTATGCCTTTTTCTAGGTACTCTTCTTCTTCATCCTCTGTGCCGGTGACAACAGTGGGACTTGTGGCTGCAACTAAAGAGGAGAAGGATGAGAGTGTTATGAATAGGCTTTCTCTTTTGACCCCTTCTTCTGTGAAAGAGCGGTGTGGTTCGAGGGGTTCCAGAAGCAGTTCCAACAGGGCTGTTTCTTCTTCTCCTCCCACGGTTCAGCCCAGTTTGCGTGCATCGTCGCTTCAGCAGACTGCTAGGAAACAGAGGAGATGCTGGTCCCCTGAGTTGCACAGACGATTTGTTAATGCCTTGCAGAAGCTTGGAGGCTCTCAAGCGGCAACACCAAAGCAAATTAGAGAGCTCATGCAGGTTGATGGCCTGACTAACGATGAAGTGAAGAGCCATTTACAAAAATACCGACTTCATACACGGAGAGTTCCAGCTTCAACTTCTAATCAGCCAGTTGTGGTTCTTGGAGGTTTGTGGATGTCTCAAGATCAGTACAATGATTCTTCAAAAGTTAGCAGTTCAGGGTCAGGTTCTCCTCAAAGTCCCCTGCATTTGGCTGCAGGGACATCCCCAACTGAAGGTGACAGCATGGATGATGAAGATGCAAGATCTGAGAGTTATAGTTGGAAAAGTCATATGCACAAACCTGGAAAAGTTAATGTATAGGATACCACTCTCCACCATGAATTTTGCAGATAAAAGTATACATGGGAGGAGTTTTACGACTACATAAGAATAATACATGATACATAAAAGAGGGTCAAAGAAAAGAGGCTGTTGGAGCTCTTGAAGGTTTAACTTGCCTTCTATACTATTTGAGTTTTGATATGAGACTCCGAATTAAAATATCTTTTCCTTCACTTCACAACCAAGCTGGTCATTTTTTTCATACCATAAAATTCTTTCATTTCTTTTTGCCATGAGAACTCTCTGATGTTCCAGCAGAAATTAATTAGTCCAATATTTAGATGAGTCTCCGAATGTTTCGGTGGAATACTGGCTTTTCTAATATCTGGATTATTTCTTCTCATACGTTTGTTTACAAGAATAAACCACTTCACAAATTTCAGACATAACTTTTCATAATTATTTCCTTTTTTTCCTCGTACTCATCAGAGGATACCTTGTTCTGTGC 1991 0.4335 MGSVPSELSLDLRPTFVPKTITDFLSHLSSQPDKLPTLHDFLARLEDELRKIDAFKRELPLSMLLLNDGAFYSLSHFPSLFLAPPLFASFPLSLSLSLSVAAISVLKAESHKCRPRDSPPVLEEFIPLKKERDHSGDDVDNDNDNDNDNDDENECRDKRNWMSSVQLWNNTSTNNNASDRKQLHKLEPKKSEEGQCVGDDPFQSCSNRNEGRRAFMPFSRYSSSSSSVPVTTVGLVAATKEEKDESVMNRLSLLTPSSVKERCGSRGSRSSSNRAVSSSPPTVQPSLRASSLQQTARKQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPASTSNQPVVVLGGLWMSQDQYNDSSKVSSSGSGSPQSPLHLAAGTSPTEGDSMDDEDARSESYSWKSHMHKPGKVNV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00129 435 MobiDBLite consensus disorder prediction 187 209 - -
Pste3g00129 435 Gene3D - 297 355 - -
Pste3g00129 435 FunFam Myb family transcription factor 297 355 - -
Pste3g00129 435 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 295 355 IPR017930 -
Pste3g00129 435 NCBIfam myb-like DNA-binding domain, SHAQKYF class 298 353 IPR006447 GO:0003677
Pste3g00129 435 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 425 IPR044787 GO:0003700|GO:0006355
Pste3g00129 435 MobiDBLite consensus disorder prediction 255 300 - -
Pste3g00129 435 Pfam Myb-like DNA-binding domain 300 351 IPR001005 -
Pste3g00129 435 MobiDBLite consensus disorder prediction 126 158 - -
Pste3g00129 435 SUPERFAMILY Homeodomain-like 295 356 IPR009057 -
Pste3g00129 435 MobiDBLite consensus disorder prediction 379 401 - -
Pste3g00129 435 MobiDBLite consensus disorder prediction 379 435 - -
Pste3g00129 435 Coils Coil 38 58 - -
Pste3g00129 435 MobiDBLite consensus disorder prediction 255 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00129 Pste-Chr3 560847 563594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00129 6 374 G2-like Transcription Factor Family AT2G03500 37.600 9.23e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste3g00129 Myb_DNA-binding 4e-07 CL0123