Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00122 CTCCAATTGTACACCTAATATTTTCTAAGAAATTATAGTGACCAAACCACTTGGTAGCATCTATTAAATAGCAGCAGCACCTTACCTCTAGAAACCAAGCTATGCACAAGATGAAGAAGCTTTCTCTTTATGTTTGTGCACTCACTTTGAGTCTTTTGGTTTTTCTTCCTCATATCAAAGCAAACCAGGCTGATAAACTTGATGAATTGATCCTATCTAGGATCTCACATAAGCCTCCAGTGACCCTTTCTTGGGCAGAGGAAGATGCATTGAAAATGGATTCTTCTGCTTATGTTGCAACCCAAGAGGGGTTAAGGCAAGTTGACAAGATTGCCACACTTCCTGGCCAACCCAAAGGGGTGAACTTTGACCAATATGCAGGCTATGTCACAGTTGATCCAAAGGCTGGAAGATCACTTTTCTATTATTTTGTTGAGTCTCCATATAACTCTTCAGCTAAACCATTAGTATTATGGCTTAATGGAGGACCAGGTTGTTCCTCATTGGGGTATGGGGCATTTGAGGAGTTGGGACCCTTTAGAGTAAACTCTGATGGCAAAACACTATTCCATAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTGTTCTTGGAATCACCTGCTGGAGTTGGCTTTTCCTACTCAAACACCACTTCTGACTATGATCATACAGGAGACAAGTCTACTGCAAAAGATGCTTATGTTTTTCTCCTCAATTGGCTAGAGAGGTTTCCAGAGTACAAAACCAGAGATTTTTACATAACAGGAGAGAGCTATGCTGGCCATTATGTGCCTCAGCTTGCATACACTATTTTGGTGAACAATAAATCCAGTCACCAAAATATTAACCTCAAAGGCATTGCTGTATATGATTTTGACCCATGTTCTAGATTCTATGTGAAAGCCTATCTAAATAGGCCAGAGGTCCAAAAAGCTCTTCATGCAAAACCTACAAATTGGACTCATTGCAGCATATGTCATATTTTGCAACAATTTACAGCTTTTATGATTGGAGTGACAGTCCAACTACCATCTTACCCATCATCAAGTATCTTATTACCAGTAGAATTAAATTGTGGATATACAGGCAATGGTGACATTGATGCAAAGGTTCCAGTCACATCTTCGAGATATTCAATCAACACACTCAAGCTCCCTATTCAAGTCTCTTGGTATCCATGGTATTCTGGAAACGAGGTTGGAGGGTATGTGGTGGGATACAAAGGAGTAACCTTTGTGACTGTAAGAGGAGCAGGACATTTTGTTCCTAGCTGGCAACCGGCAAGATCCTTGACCATGATCTCATCATTCCTCAATGGAACCTTGCCTCCTGCTTCACCATGGAAAGGGTTCTAATTAAGTATGAATGGATATTTTGAAGAGTAATAAGGAAACTTTTTGAAAGAATTTTTTTCTGAAACTGTTGTGATTGATTGATTATAATTTATTGGCAATCAACAATTTTGGGTAAGATAGTTAATTAAAGACAAGTCAAACCCATTAAAATTAGTGATTTTCAAAATATTCTAATCAATCACTTGAAAAGTTCCAGAAAGAGAGTTTTAGAGAAAATTTTCCTGATACTCTTCTTCTTGATATTTTATGTGCTTAACCAATAAAATTTACTGCCTTGAGATGCTGTTATGTA 1650 0.3824 MHKMKKLSLYVCALTLSLLVFLPHIKANQADKLDELILSRISHKPPVTLSWAEEDALKMDSSAYVATQEGLRQVDKIATLPGQPKGVNFDQYAGYVTVDPKAGRSLFYYFVESPYNSSAKPLVLWLNGGPGCSSLGYGAFEELGPFRVNSDGKTLFHNKYAWNEVANVLFLESPAGVGFSYSNTTSDYDHTGDKSTAKDAYVFLLNWLERFPEYKTRDFYITGESYAGHYVPQLAYTILVNNKSSHQNINLKGIAVYDFDPCSRFYVKAYLNRPEVQKALHAKPTNWTHCSICHILQQFTAFMIGVTVQLPSYPSSSILLPVELNCGYTGNGDIDAKVPVTSSRYSINTLKLPIQVSWYPWYSGNEVGGYVVGYKGVTFVTVRGAGHFVPSWQPARSLTMISSFLNGTLPPASPWKGF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00122 418 Gene3D - 320 407 - -
Pste3g00122 418 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Pste3g00122 418 Gene3D - 262 292 - -
Pste3g00122 418 SUPERFAMILY alpha/beta-Hydrolases 77 408 IPR029058 -
Pste3g00122 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Pste3g00122 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 377 390 IPR001563 GO:0004185|GO:0006508
Pste3g00122 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Pste3g00122 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Pste3g00122 418 ProSitePatterns Serine carboxypeptidases, histidine active site. 377 394 IPR033124 GO:0004185
Pste3g00122 418 Gene3D alpha/beta hydrolase 71 259 IPR029058 -
Pste3g00122 418 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 268 394 IPR001563 GO:0004185|GO:0006508
Pste3g00122 418 Pfam Serine carboxypeptidase 259 407 IPR001563 GO:0004185|GO:0006508
Pste3g00122 418 Pfam Serine carboxypeptidase 81 258 IPR001563 GO:0004185|GO:0006508
Pste3g00122 418 FunFam Carboxypeptidase 327 407 - -
Pste3g00122 418 FunFam Carboxypeptidase 71 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00122 Pste-Chr3 522073 529214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00122 320 407 Calmodulin-binding Proteins AT2G22960 30.526 2.44e-09 54.7