Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00117 TCATGACTTGTAAACTTGTCATCTGCTTCACTTTCTTCTTTGTTTCTTTTGTTCATATGTTTCCGTCTGGTAACCCGAGGGATCCATATGAACAATATGGTAGAAATTATAACCAGCTTGACATCAATTTCTACGATAGATCATGCCCCAATTTGCCACAGATTGTTAGATATGGTGTTTGGTTAGCCATAAGAAATGACAACAGAATGGCAGCATCACTTCTTCGGTTGCACTTTCACGATTGCATAGTGAATGGCTGTGATGCTTCTGTGCTTCTTGATGATACACCATATTTCACGGGCGAAAAGAATGCTCTTCCTAATCACAATTCACTTCGGGGGTTTGAAGTCATTGATAGCATAAAAGAGCAAGTTGAAAGGCTGTGTCCATACACAGTCTCCTGTGCTGATATATTAGCCTTGGCAGCTAGGGAAGCTATTGATCTGGTTGGAGGACCTTCTTGGCCTGTTGCATTAGGCCGAAGAGATGCAATAACAACCAGTAAGACGGATGCTGAAAACCAAATTCCCTCACCAATTGAGCCTCTAGAAAATATCACTGCAAAGTTTTTCTCCAAGGGTCTTGACTTGAAGGATGTTGTAATCCTTTCAGGAGGACATACAATTGGTTTTGCTCGATGCTTCACCTTCAAAGGGAGACTTTTTGACTTTCAAGGCTCTGGCAAACCTGATCCTGTGCTTGACTTGTCACTCCTCTCAAAATTGCAAACCATGTGTCCAAATGAAGACACTTCAAACAGCAATCTAGCACCTCTTGATGCTACAAGTACTTTTATGTTTGACAATCAGTATTATAGAAATCTTGCATACAACACAGGGCTTCTCCAATCTGACCAAGCACTAGTTATGGATCGAACTACTGCTCCTATGGTTTATTATTACAGCAAAAACAGGTTTTCCTTCTATAATGATTTTGCCGATTCCATGGTGAAGCTTAGTAATGTAGGAGTACTTACAGGAGGGTACGGACAAATTAGAAGGCAATGTGGCTCTGTAAACTACTAGTGCTTGTATTTTAAACTTCTTAGAAAAACCTCAATAATGTAAGTAAGGAAGCCAATTTAAGTCGCTTGGA 1095 0.4027 MTCKLVICFTFFFVSFVHMFPSGNPRDPYEQYGRNYNQLDINFYDRSCPNLPQIVRYGVWLAIRNDNRMAASLLRLHFHDCIVNGCDASVLLDDTPYFTGEKNALPNHNSLRGFEVIDSIKEQVERLCPYTVSCADILALAAREAIDLVGGPSWPVALGRRDAITTSKTDAENQIPSPIEPLENITAKFFSKGLDLKDVVILSGGHTIGFARCFTFKGRLFDFQGSGKPDPVLDLSLLSKLQTMCPNEDTSNSNLAPLDATSTFMFDNQYYRNLAYNTGLLQSDQALVMDRTTAPMVYYYSKNRFSFYNDFADSMVKLSNVGVLTGGYGQIRRQCGSVNY 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00117 340 ProSiteProfiles Plant heme peroxidase family profile. 38 339 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 Gene3D Peroxidase, domain 2 176 318 - -
Pste3g00117 340 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PANTHER PEROXIDASE 72-RELATED 37 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Pste3g00117 340 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 Gene3D - 42 339 - -
Pste3g00117 340 FunFam Peroxidase 42 187 - -
Pste3g00117 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Pste3g00117 340 FunFam Peroxidase 176 318 - -
Pste3g00117 340 Pfam Peroxidase 62 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 SUPERFAMILY Heme-dependent peroxidases 38 339 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste3g00117 340 CDD secretory_peroxidase 38 338 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00117 Pste-Chr3 506197 509704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00117 9 336 Peroxidase AT1G49570 60.423 7.41e-140 399