LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste3g00117	TCATGACTTGTAAACTTGTCATCTGCTTCACTTTCTTCTTTGTTTCTTTTGTTCATATGTTTCCGTCTGGTAACCCGAGGGATCCATATGAACAATATGGTAGAAATTATAACCAGCTTGACATCAATTTCTACGATAGATCATGCCCCAATTTGCCACAGATTGTTAGATATGGTGTTTGGTTAGCCATAAGAAATGACAACAGAATGGCAGCATCACTTCTTCGGTTGCACTTTCACGATTGCATAGTGAATGGCTGTGATGCTTCTGTGCTTCTTGATGATACACCATATTTCACGGGCGAAAAGAATGCTCTTCCTAATCACAATTCACTTCGGGGGTTTGAAGTCATTGATAGCATAAAAGAGCAAGTTGAAAGGCTGTGTCCATACACAGTCTCCTGTGCTGATATATTAGCCTTGGCAGCTAGGGAAGCTATTGATCTGGTTGGAGGACCTTCTTGGCCTGTTGCATTAGGCCGAAGAGATGCAATAACAACCAGTAAGACGGATGCTGAAAACCAAATTCCCTCACCAATTGAGCCTCTAGAAAATATCACTGCAAAGTTTTTCTCCAAGGGTCTTGACTTGAAGGATGTTGTAATCCTTTCAGGAGGACATACAATTGGTTTTGCTCGATGCTTCACCTTCAAAGGGAGACTTTTTGACTTTCAAGGCTCTGGCAAACCTGATCCTGTGCTTGACTTGTCACTCCTCTCAAAATTGCAAACCATGTGTCCAAATGAAGACACTTCAAACAGCAATCTAGCACCTCTTGATGCTACAAGTACTTTTATGTTTGACAATCAGTATTATAGAAATCTTGCATACAACACAGGGCTTCTCCAATCTGACCAAGCACTAGTTATGGATCGAACTACTGCTCCTATGGTTTATTATTACAGCAAAAACAGGTTTTCCTTCTATAATGATTTTGCCGATTCCATGGTGAAGCTTAGTAATGTAGGAGTACTTACAGGAGGGTACGGACAAATTAGAAGGCAATGTGGCTCTGTAAACTACTAGTGCTTGTATTTTAAACTTCTTAGAAAAACCTCAATAATGTAAGTAAGGAAGCCAATTTAAGTCGCTTGGA	1095	0.4027	MTCKLVICFTFFFVSFVHMFPSGNPRDPYEQYGRNYNQLDINFYDRSCPNLPQIVRYGVWLAIRNDNRMAASLLRLHFHDCIVNGCDASVLLDDTPYFTGEKNALPNHNSLRGFEVIDSIKEQVERLCPYTVSCADILALAAREAIDLVGGPSWPVALGRRDAITTSKTDAENQIPSPIEPLENITAKFFSKGLDLKDVVILSGGHTIGFARCFTFKGRLFDFQGSGKPDPVLDLSLLSKLQTMCPNEDTSNSNLAPLDATSTFMFDNQYYRNLAYNTGLLQSDQALVMDRTTAPMVYYYSKNRFSFYNDFADSMVKLSNVGVLTGGYGQIRRQCGSVNY	340

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste3g00117	340	ProSiteProfiles	Plant heme peroxidase family profile.	38	339	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pste3g00117	340	Gene3D	Peroxidase, domain 2	176	318	-	-
	Pste3g00117	340	PRINTS	Plant peroxidase signature	313	326	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste3g00117	340	PRINTS	Plant peroxidase signature	48	67	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste3g00117	340	PRINTS	Plant peroxidase signature	150	165	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste3g00117	340	PRINTS	Plant peroxidase signature	273	290	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste3g00117	340	PRINTS	Plant peroxidase signature	197	209	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste3g00117	340	PRINTS	Plant peroxidase signature	257	272	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste3g00117	340	PRINTS	Plant peroxidase signature	72	92	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste3g00117	340	PRINTS	Plant peroxidase signature	112	125	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 25 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste3g00117	Pste-Chr3	506197	509704	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste3g00117	9	336	Peroxidase	AT1G49570	60.423	7.41e-140	399

Showing 1 to 1 of 1 entries