Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00115 ACTTGGGTCTTCGTCCAACGTTTTTTCTTCCGCTGTTATATATTCACTCACCACACACTCTCTCTCTGTTTCTGCTACTCTGTTGCAGCGCTCGCATTTTTCATCGCCCCATCTTCCCTCCATCGCTGAATAGTCAATACTGCACCATTGCACCAGTATAGTGACGACATGTTCCATCTTAGCCCCTACCATCTAATCAAGTATACTCACCTTTACACCATGTGGGTAGGGACGGATATACCTTATATCTTGAGTACTCCTGTGGTTGAACGTGTTTCAGAATGTTTCGTCAAACCACAACAATATTCCACGGAAAAATCAAAACAAATATGTAATTTAACACCTTGGGATATTGCTATGTTATCTTGTCACTATATTCAAAAGGGTCTTCTCTTCAAGAAGCCCTCTCCAGTTCTTAACAAACAAGATTTCATAGAGAATATGTTGAAGAAGTTGAAGCACTCTCTTTCTCTTGCCCTCTTCCATTTCTATCCATTGTCTGGTTGCCTTGTGACCCAAAAAACCAAACACCCTTCTTCCTCTTACACTATTTTCATTGATTGCAACAACAGTAGAGGAGCTAGATTCATTTATGCAACTTTGGATATGACCATATCTGACATCATCTCTCCTATTGATGTCCCAATAATTGTTCAAACATTGTTTGACCACCACAAAGCAGTGAACCATGATGGTCATACAATGCCCTTGTTGTCCGTACAAGTTACTGAACTAGTAGATGGTGTTTTCATAGGCTGTTCCATGAATCACACTGTTGGTGATGGGACTTCATATTGGAACTTCTTCAATACATGGTCTGAGATCTTTCAAGCTCATGGCCATTGCCATGAACATGTTGATGTTCCCATTTCACACCCACCTATTCACAATCGTTGGTTTCCAGAGGGTTGCACTCCATTCATCAATCTTCCTTTCAAACATCATGATGAATTTATTAGCAGATATGAAACACCCTTGGTGCTTGAGAACAATCTAGGCTCACCAAGGTTCAACATGTATGGGAATGAATTTGGAATGGGTAAAGCAGTAGCAGTTAGAAGTGGGTATGCCAACAAATTTGATGGAAAAGTGATGTCATATCCTAGCCATGAAGGAGGAGGAGGTGTAGATTTGGAAATATGCTTGTCACCTGTTGTAATGAGTGCACTGGAATCAGACCAGGAGTTTTTGAATGTAGTTTCAGTTTCCAATCATCTCTACTAA 1224 0.4044 MFHLSPYHLIKYTHLYTMWVGTDIPYILSTPVVERVSECFVKPQQYSTEKSKQICNLTPWDIAMLSCHYIQKGLLFKKPSPVLNKQDFIENMLKKLKHSLSLALFHFYPLSGCLVTQKTKHPSSSYTIFIDCNNSRGARFIYATLDMTISDIISPIDVPIIVQTLFDHHKAVNHDGHTMPLLSVQVTELVDGVFIGCSMNHTVGDGTSYWNFFNTWSEIFQAHGHCHEHVDVPISHPPIHNRWFPEGCTPFINLPFKHHDEFISRYETPLVLENNLGSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVMSYPSHEGGGGVDLEICLSPVVMSALESDQEFLNVVSVSNHLY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00115 351 Gene3D - 34 251 IPR023213 -
Pste3g00115 351 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 278 341 - -
Pste3g00115 351 Pfam Transferase family 278 340 - -
Pste3g00115 351 Pfam Transferase family 33 223 - -
Pste3g00115 351 Gene3D - 262 341 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00115 Pste-Chr3 485194 491851 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00115 96 339 Monolignol Biosynthesis Gene Families AT5G48930 28.340 1.45e-10 60.5