Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00098 AAAGGGGGAACAACATGTAGCCAAACCTGTGTGTGGCAACAAACAATACAACCCCCCTTTGCCATCACTGTTCTCATTACCATCCTCTTCTCTTTTCTTTTCTTCTTCATTTCAATTTCACAAATCACAACCCTTCTCTTCTCTTCTCTCCCTCACTTCCCAATTCAATGAACACCCAAAACCCAATACTCACGTGCTTGCCACGTGTCCCTTGAAATTACCCTCCTTCTTCTTCTTCTTCCCACACAAATCCACTTCCCCCAAAGCTTCTACCCTCTTTAAAACCCTCTTCAAAGTTTGAATCTTTAGCACAAAACAACAAGACCCAGAAAGTTTTTTCCCGCAATGGCGTGACCAATGGTTCTTTAGCGCAGCTTCCGCGATCGCTCAGCAATGGGGGTTTGCACTTCGAAGCCGCAGAAGCCGAACCCTTACGGGCTTCGCGAAGCCGAAGCCGAAGCCGAACACGACCCTTCGCGAATCCCGAAAACCCCACTAACTCCGAACAACGCCGAGAAAACCCGCCGGAAAGATGACGTCACCGCCGGAAAGCAGTCCCCGTTCTTCCCGTTCTACAGCCCGAGCCCCGCACACTTCTTCAAGAAGTCTCCGGCGCCGGCGGGAGGAAGCCGGAGCGCGAGCTCCACGCCGAGAAGGTTTTTCCGGCGGCCGTTCCCGCCGCCGTCGCCGGCGAAACACATAAGGGCTGTGCTTGCGCGGCGGCAGGGGAAGAAGGCGGCGTCGGCGGCGGCGATACCGGAGGAGGGGGAGGAGGGTGCGGCGGATTTGGATAAGAGGTTTGGGTTCTCTAAAGAGTTCACTAGTAGGTTGGAGGTTGGTGAAGAAGTGGGTCGAGGGCATTTTGGGTATACTTGTTCTGCTAGGTTCAAGAAGGGGGAGCTTAAGGGTCAGCAAGTTGCTGTTAAGGTCATACCAAAAGCAAAGATGACAACAGCAATTGCTATTGAAGATGTGAGAAGGGAGGTGAAAATTCTGAGAGCTTTGAATGGACATAGCAATTTGATACAGTTCTATGATGCATTTGAAGACCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGCGGGGAGCTCTTAGATATGATATTATCAAGAGGAGGGAAATACTCTGAGGATGATGCGAAGGCTGTCATGGTGCAGATACTAAATGTTGTTGCATTCTGTCATCTTCAGGGTGTGGTGCACCGAGATCTTAAGCCAGAGAATTTTTTGTATGCTAAAAAGGATGAAAGTTCTGAGTTGAAAGCCATAGACTTTGGGTTATCAGATTTTGTCAGACCAGATGAAAGGCTTAATGATATTGTTGGAAGTGCATACTATGTAGCCCCTGAAGTTCTCCATAGATCATATAGCACAGAGGCTGATGTATGGAGTATAGGCGTGATAGCATATATTCTTTTATGTGGTAGTCGCCCATTTTGGGCTCGAACAGAGTCTGGTATTTTTAGGGCAGTTTTGAAAGCTGATCCCAGCTTTGATGAAACACCGTGGCCGTCTTTATCTTCAGAAGCAAAGGATTTTGTCAAACGCTTATTGAATAAGGACCCACGGAAGCGAATATCTGCTGCTCAGGCTCTAAGTCATCCTTGGATACGTAATTACAATAATGTAAAAGTCCCACTTGATATTTTGATATTTAAGCTCATGAAGACATATATGAGATCGTCCTCCTTACGCAAGGCTGCCTTAAGGGTGCGTATTTCCATTGTTGAAAGAGAAGTTAAGCCAATTTTCTGTGGTTGCTATGCTTCCTGTTGA 1782 0.4725 MGVCTSKPQKPNPYGLREAEAEAEHDPSRIPKTPLTPNNAEKTRRKDDVTAGKQSPFFPFYSPSPAHFFKKSPAPAGGSRSASSTPRRFFRRPFPPPSPAKHIRAVLARRQGKKAASAAAIPEEGEEGAADLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLIQFYDAFEDQDNVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYAKKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDETPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNNVKVPLDILIFKLMKTYMRSSSLRKAALRVRISIVEREVKPIFCGCYASC 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00098 462 ProSiteProfiles Protein kinase domain profile. 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00098 462 Pfam Protein kinase domain 147 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00098 462 Gene3D Transferase(Phosphotransferase) domain 1 236 433 - -
Pste3g00098 462 Gene3D Phosphorylase Kinase; domain 1 148 235 - -
Pste3g00098 462 SMART serkin_6 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00098 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Pste3g00098 462 CDD STKc_CAMK 147 407 - -
Pste3g00098 462 FunFam Calcium-dependent protein kinase SK5 318 413 - -
Pste3g00098 462 SUPERFAMILY Protein kinase-like (PK-like) 142 430 IPR011009 -
Pste3g00098 462 PANTHER SERINE/THREONINE-PROTEIN KINASE 131 434 - -
Pste3g00098 462 FunFam CDPK-related kinase 1 139 234 - -
Pste3g00098 462 FunFam CDPK-related kinase 3 138 310 - -
Pste3g00098 462 ProSitePatterns Protein kinases ATP-binding region signature. 152 178 IPR017441 GO:0005524
Pste3g00098 462 MobiDBLite consensus disorder prediction 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00098 Pste-Chr3 436043 439348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00098 1 441 EF-hand Containing Proteins AT3G50530 67.769 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste3g00098 Pkinase 2.4e-72 CL0016