Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00015 ATGGTGAAACTTGCATTGGGTTTCGGAGGTTCCTTCTTTTTTTATCTAGTTTTGGTTATTTCTTTCCATGTTATCTCGGTTAGGTGTCAAGATGTGGAGGTGATGGAAATTTTGAAGAGCATGATCAATGTCCCTATTAACTTCCAGTGGATAGGGTCAGATGTGTGCAAATGGAGACATGTTGATTGTGATTCATCTAAACGTGTAATAGCTATTCAAATTGGGAACCAAAACCTTACAGGTTCTCTCCCTAAGGAGCTTGTGAAGCTAACGGCGTTAGTACATTTTGAATGTCAAAGCAATAGTCTCACAGGGCCATTCCCTTACCTTTCAAAATCCTTGCAAAAGCTAATAATTCATGACAATAAGTTCACCTTCATTCCTAATGATTTCTTCAAGGGTATGAGCAATTTGCAAGAGGTGATAATTGATGACAACCCCTTATCTCAATGGCATATTCCAGATACTCTTAGGGACTGTGTTGCACTCCAAACATTTAGTGCACAAAGTGTTGGTTTAATAGGCACAATTCCTGACTTTTTTGGTAGAGATGGTCCCCTCCCAGGTTTGGTTCTATTGGCATTGTCTGATAATTTTCTAGAAGGTCCATTGCCCCAAAGCCTAGCGCGTAGTTCAATCGAGTACCTTTTGGTTAATGGACAAAAAAGCATCTCTAAGCTCAATGGTACCCTTATTGTGTTACACAGCATGAAATCTTTAAGACAAATTTGGGCTAATGGGAATTCATTCACTGGTCCTATACCAGACTTGTCACAGCATGATCAACTTTTTTATGTGAATTTAAGGGATAACCAATTAACAGGTGTTGTTCCACCTTCTTTGATTTCTCTTCCAAGTTTGAAGTTTGTAAACTTAACTAATAATCTTCTTCAAGGACCCCCTCCTAAGTTCAAAGATGGGGTAGGAGTGGACAATAACATGGATAATAGGAGAAACCAATATTGCACAAATGTACCAGGGCAACCTTGTAGTCCTATCGTAAATGCTTTACTATTTGTTGTTGAACCTCTAGGTTATCCTCTTAAGCTTGCTCAAAGTTGGCAGGGTAATGATCCATGTGCTAATAAATGGAATGGTATAGTTTGTTCTAATGGAAACATTTCAGTTATCAATTTTCAAAACATGGGTTTGTCTGGCACTATTTGTCCATGTTTTGCTAGGTTTACTTCTGTGACAAAGTTACTTCTTGCTAACAATGCTCTGACTGGTACCATACCAAATGAACTTACTACTTTGCCTCATTTGCAAGAATTTGATGTTTCCAACAATAATTTATATGGCAAAGTACCTCCATTTCATAAAGATGTGGTTCTTAAATTAGGTGGGAATCTTGATATTGGAAAAGATAAACCAACTAGCTCAGATTTTGGAGGCAATGGTAGCAACCATGGTAGTAATCATAATACTACAATAGCAATTGGAATTGTGGCAATGGTAGTTGTTGTTCTTGTTGGGGTCCTCATACTTGTTAAGTTAAAAAACAAGTGGAATTATTTACAGAAAACTATAAATCCAACTATAGCTGTGGCATCTCCTCATGGGGATGGAAATGTTCAAAAGATAAGTTGTGGAGGTTATGGGGAAGGAAACGCTAGTGCATTATTAAGTCCCACATGGAGTTCTTATCAAGTGGAAGCTAGTAACATGTTAATTTCAATTCAAGTTTTGAGAGAAGTTACCAACAATTTTGGTGAAGAAAACATACTGGGGAAAGGGGGATTTGGCACTGTATACAAAGGAGAGTTGCATGATGGAACAAAGATCGCAGTGAAAAGAATGCAATCAGCCGGATTGGTAGATGAGAAAGGGTTGAGTGAGTTCACAGCTGAAATTGCGGTGCTTACAAAGGTTCGACACAAAAATTTGGTTGCCCTTTTAGGATTTTGCTTGGATGGAAGTGAAAGACTTCTTGTGTATGAATACATGCCTCAAGGTGCTCTAAGTAAACATTTGATTAATTGGAAAAGTGAAGGACTAAAACCACTTGAATGGAAAACAAGACTTAGTATTGCCTTGGATGTTGCTAGAGGTGTTGAATATCTTCATGGTTTGGCACAACAAATTTTTATCCATAGAGATCTCAAACCATCCAACATTTTGCTTGGAGATGATATGCGTGCCAAAGTATCAGACTTTGGACTAGTTCGACTTGCACCAGAAGGGAAAACCTCGTTCCAAACTAAGCTTGCAGGAACTTTTGGATATATGGCTCCAGAGTATGCAGCCACTGGACGACTTACAACTAAGGTTGATGTTTATAGTTTTGGAGTGATTCTTATGGAGATGATAACTGGTAGGAAAGCACTTGATGATAGTCTACCAGAAGAGGACATTCACCTTGTTACGTGGTTCCGTAAAATGCTAATAAATAAGGATTCATTTAACACAACTATCGACCCAACAATTAAAATTGATGAGGAAATATTGGCCAATATTAGCATCGTCGCAGAGTTGGCAGGGCATTGTTGTGCAAGGGAGCCTTATCAACGTCCTGACATGAGTCACGTAGTGAATGTACTATCACCTTTTGTAGAGGTGTGGAAGCCTTCAGAAACAAATGATAATGACATATATGGAATTGACTTTGATATGACATTACCAGAAGCACTACAAAGGTGGAAAGCTTTTGAAGGAAATAGCACTACCATGGAATTAACATCTATTTCATCAGAGCATCTTAACGGAGACATTACAAAGTCAAGCACACAAACTCACCCATCTACAATTAAAGGTCCTTTTACATCTTTAGATGAACAATGA 2781 0.3822 MVKLALGFGGSFFFYLVLVISFHVISVRCQDVEVMEILKSMINVPINFQWIGSDVCKWRHVDCDSSKRVIAIQIGNQNLTGSLPKELVKLTALVHFECQSNSLTGPFPYLSKSLQKLIIHDNKFTFIPNDFFKGMSNLQEVIIDDNPLSQWHIPDTLRDCVALQTFSAQSVGLIGTIPDFFGRDGPLPGLVLLALSDNFLEGPLPQSLARSSIEYLLVNGQKSISKLNGTLIVLHSMKSLRQIWANGNSFTGPIPDLSQHDQLFYVNLRDNQLTGVVPPSLISLPSLKFVNLTNNLLQGPPPKFKDGVGVDNNMDNRRNQYCTNVPGQPCSPIVNALLFVVEPLGYPLKLAQSWQGNDPCANKWNGIVCSNGNISVINFQNMGLSGTICPCFARFTSVTKLLLANNALTGTIPNELTTLPHLQEFDVSNNNLYGKVPPFHKDVVLKLGGNLDIGKDKPTSSDFGGNGSNHGSNHNTTIAIGIVAMVVVVLVGVLILVKLKNKWNYLQKTINPTIAVASPHGDGNVQKISCGGYGEGNASALLSPTWSSYQVEASNMLISIQVLREVTNNFGEENILGKGGFGTVYKGELHDGTKIAVKRMQSAGLVDEKGLSEFTAEIAVLTKVRHKNLVALLGFCLDGSERLLVYEYMPQGALSKHLINWKSEGLKPLEWKTRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKTSFQTKLAGTFGYMAPEYAATGRLTTKVDVYSFGVILMEMITGRKALDDSLPEEDIHLVTWFRKMLINKDSFNTTIDPTIKIDEEILANISIVAELAGHCCAREPYQRPDMSHVVNVLSPFVEVWKPSETNDNDIYGIDFDMTLPEALQRWKAFEGNSTTMELTSISSEHLNGDITKSSTQTHPSTIKGPFTSLDEQ 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00015 926 FunFam receptor protein kinase TMK1 534 648 - -
Pste3g00015 926 Gene3D Ribonuclease Inhibitor 29 328 IPR032675 -
Pste3g00015 926 SUPERFAMILY L domain-like 336 439 - -
Pste3g00015 926 SMART serkin_6 570 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00015 926 ProSiteProfiles Protein kinase domain profile. 570 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00015 926 FunFam Receptor-like kinase TMK4 29 327 - -
Pste3g00015 926 FunFam Leucine-rich repeat receptor-like kinase 332 456 - -
Pste3g00015 926 SUPERFAMILY Protein kinase-like (PK-like) 546 847 IPR011009 -
Pste3g00015 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Pste3g00015 926 CDD STKc_IRAK 576 850 - -
Pste3g00015 926 Pfam Protein kinase domain 572 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g00015 926 Gene3D Transferase(Phosphotransferase) domain 1 649 869 - -
Pste3g00015 926 PANTHER OSJNBA0070M12.3 PROTEIN 14 924 - -
Pste3g00015 926 SUPERFAMILY L domain-like 32 304 - -
Pste3g00015 926 FunFam receptor protein kinase TMK1 649 866 - -
Pste3g00015 926 Pfam Leucine rich repeat N-terminal domain 351 370 IPR013210 -
Pste3g00015 926 Pfam Leucine rich repeat N-terminal domain 39 64 IPR013210 -
Pste3g00015 926 Gene3D Phosphorylase Kinase; domain 1 540 648 - -
Pste3g00015 926 Gene3D Ribonuclease Inhibitor 333 457 IPR032675 -
Pste3g00015 926 MobiDBLite consensus disorder prediction 901 926 - -
Pste3g00015 926 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00015 Pste-Chr3 80950 84244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00015 69 847 Receptor kinase-like Gene Family AT5G07280 31.333 1.20e-80 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pste3g00015 Pkinase 1.1e-48 CL0016