Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00003 GAAAGACCCAGCTCATAAGTAAAAATAAAAATTACTCGCCTTGCATGAAAGTGTCGTGCTTTAACTAGAGACTAGAGAAGAAGATTTTGGAGAATTTCAATTTTCCAGACGCAGTGGGAAACAATCACCAACAAAGGGGCAGAGAGAAAATTGTTGGTGAGATGGGTCTTGGTTTGAATATGAAGAGCCTGAGGCACCACCCTGTGGCTTTGAAGTTACATGAGCAGGCGGGAAGCAAAAGAAAGTACACTTTCATTCAGACACATAGGTCGTGGCTTCCCAAATTTTTGATGCTGTGGATCCTTCTCATGGCTCTAATTGGCTGCTTCATCTATAGTAAAATGGATGCTGACACTAAAATCAGAAGGAAAGAAGTTCTAGGTAGCCTCTGTGATCAAAGAGCGAGAATGCTGCAAGATCAATTCAGTGTCAGTGTCAACCATGTCCATGCCCTTGCCATCCTTGTTTCAACCTTCCATTACTACAGAACCCCTTCTGCAATTGACCAGGACACCTTTGCAGAGTATACAGCCAGGACAGCATTTGAACGGCCATTACTCAGTGGGGTGGCCTATGCACAAAGGGTAATTAACTCAGAGAGGGAAATCTTTGAGAAGCAACACGGATGGATTATAAAGACAATGGAAAGAGAGCCTTCCCAAGTTAGAGATGAGTATGCCCCAGTGATATTTGCACAAGAAACTGTCTCTTACCTTGAATCTCTCGATATGATGTCTGGGGAGGAGGACCGAGAGAATATTTTGAGGGCTAGGGCCACTGGGAAAGCTGTTCTAACTAGTCCTTTTAGGCTGTTGGGTTCTCATCATCTTGGTGTGGTTTTAACATTTCCTGTTTATAAGTCTAAGATCCCTCCAAAGCCAACAATGGAAGAGCGCATTAAAGCAACAGCGGGATATGTTGGTGGATCCTTTGATGTTGAGTCCCTCGTGGAGAATTTACTTGGTCAACTTGCTGGTAACCAAGCAATTTTGGTTAACGTTTATGATATCACAAACTCTACTGACCCCTTAATCATGTATGGCAACCAAAATGAAGAAGGTGATATGGCTCTTGTCCATGAAAGTAAGCTTGATTTTGGAGATCCATACAGGAAACATAAAATGATATGTAGGTATCACCAGAAGGCACCAACAAATTGGATAGCACTTACCACAGCATTCTTATTTTTTGTGATTCTTTTATTAGTGGGTTATATTTTATATGGTGCTGGAAATCATATTGTCAAAGTAGAGGATGATTTTCAAGAAATGCAGGAATTAAAAGTTCGAGCAGAAGCCGCTGACGTTGCCAAGTCACAGTTTCTAGCTACTGTATCTCATGAAATTAGAACACCCATGAATGGCATTTTAGGAATGCTTGGTCTCCTTCTAGGCACTGAATTGAGTTCAACTCAAAGAGATTATGCTCAGACTGCTCAAGCATGTGGCAAGGCTCTGATAGCATTAATAAATGAGGTGCTTGACCGAGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAAGCAGTTCCATTTGACATTCGATCCATACTTGATGATGTCCTTTCTCTTTTTTCTGAGAAGTCTCGACACAAAGGTTTAGAGCTGGCAGTATTTGTTTCAGATAAAGTTCCAGATATTGTTATGGGAGATCCTGGGAGATTCAGACAAATAGTAACAAATCTTGTTGGCAACTCTGTTAAATTCACTGAGCGAGGACATATATTTGTGAAAGTCCATCTAGCTGAAAATAGAATGTCAACAATGAATGGAAAAATTGACACTTTTCTAAAAGGAGGATCAGATGAAGTTGTGCATAGGTCTGGTGGTTATAATTTTAAAACTTTAAGTGGATATGAAGCAGCTGATGAGTGGAACAGCTGGGACAACTTTAAGCATCTAATTGCAGATGAAGAATTTTACTTTGATGCTTCAGTTAAAAAGGTGGCCAATGAATCTTATGAGCAAGTCAACTTGATGGTCAGTGTGGAGGACACTGGAACTGGCATTCCTTTCTCAGCCCAAGATAGGATTTTCATGCCTTTTGTGCAGGCAGACAGCTCAACCTCTCGACATTATGGTGGAACTGGCATTGGCTTGAGTATAAGTAAGTGCCTGGTTGAACTAATGGGCGGTGAGATAAGTTTCATAAGCCGACCCCAGATTGGGAGCACATTTTCATTTACTGCAGATTTTGGAACAATTAAGAAAAATTCAATAACTGACACGAAGAAACATAATTTGGAAGATCTGCCTTCCAGTTTTAGAGGGCTTAAAGCCGTTGTGGTTGATGGAAAACCTGTTAGAGCAGCTGTGACTAGATACCATCTGAAGAGACTAGGGATACAGGCTAAAGTTGCAAGTAGCATCAATAAGCCTGATATTATTTTTGTTGAGAAAGATTCATGGGTTTGTGGAGAGGAAGGGATTTTCAATGTGTGGCAACTGGACTGGAAACAGAACGGGAAAATGTTTAAGATACATCAAATGATCCTTCTTGCAACCAACATTAGTAATGCTGAATTTGATAAAGCTAAAGCAGCAGGTTTCAGTGATACTGTGATCATGAAGCCTCTGAGAGCTAGCATGGTGGCTGCTTGTCTTCAGCAAGTTCTGGGAATGGTTCCGGAAAGGCAGCAAGGGAAAGACATGAAGTCTAATGGTTCCCATTTTGTAAGAAGCGTTCTTTGTGGAAAAAAAATTTTAGTGGTTGATGACAATGTGGTAAACCGGAGGGTAGCTGCAGGTGCGTTAAAAAAATTTGGAGCTGATGTGCAGTGTGCCGATAGTGGGAAAACTGCTCTTGAAATGCTTCAATTGCCTCACAATTTTGACGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGGTTTGAAGCAACGCAACGAATTCGGGTGATGGAGAGAAAGGCAAATGAGCAGCAGATGAATGGTGAAGGAAATGGCTGGAAAAACAAGTACCATATACCTATATTGGCCATGACAGCTGATGTAATTCACGCAACATACGATGAGTGCGTGAAATGTGGGATGGACGGATATGTCTCAAAGCCTTTTGAGGAAGAGAATCTGTATCAAGCAGTTGCCAAGTTCTTCAACCCCTCAGACAACTCATTACAGAATGGCAACAGAACAACTTAATTGAATTGGAGACACTCTCACCGACTGGCATTTTTCATAATATAGTTTGCTGGTGATTTGAATGTACTTCAATACACAGCATCAGTTGGTTTTCAAGATATCTGAGGATATGCATGCAAACTTGATACACGCATATGCGGTGATCATTTCTAACCACCACCTGAACATGATTTCAATCTCACTAAATGTATACACCACTACCCCTATTTGTGTATAGATTCTCCCACGGGATGAGGAAAATCATGTAAATTCATTTTTTTCTCTTTTACTTTTGTGTAAAATTGTCTCGTATAAGATTTGACTAATTAGTTACTATATTTATTGGCAGCCCGGGTGATATGAACAATTGCCCTTTTAATTCACTCGGTTTTATAGCAC 3518 0.4073 MGLGLNMKSLRHHPVALKLHEQAGSKRKYTFIQTHRSWLPKFLMLWILLMALIGCFIYSKMDADTKIRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRTPSAIDQDTFAEYTARTAFERPLLSGVAYAQRVINSEREIFEKQHGWIIKTMEREPSQVRDEYAPVIFAQETVSYLESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKIPPKPTMEERIKATAGYVGGSFDVESLVENLLGQLAGNQAILVNVYDITNSTDPLIMYGNQNEEGDMALVHESKLDFGDPYRKHKMICRYHQKAPTNWIALTTAFLFFVILLLVGYILYGAGNHIVKVEDDFQEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLGTELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDIRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAENRMSTMNGKIDTFLKGGSDEVVHRSGGYNFKTLSGYEAADEWNSWDNFKHLIADEEFYFDASVKKVANESYEQVNLMVSVEDTGTGIPFSAQDRIFMPFVQADSSTSRHYGGTGIGLSISKCLVELMGGEISFISRPQIGSTFSFTADFGTIKKNSITDTKKHNLEDLPSSFRGLKAVVVDGKPVRAAVTRYHLKRLGIQAKVASSINKPDIIFVEKDSWVCGEEGIFNVWQLDWKQNGKMFKIHQMILLATNISNAEFDKAKAAGFSDTVIMKPLRASMVAACLQQVLGMVPERQQGKDMKSNGSHFVRSVLCGKKILVVDDNVVNRRVAAGALKKFGADVQCADSGKTALEMLQLPHNFDACFMDIQMPEMDGFEATQRIRVMERKANEQQMNGEGNGWKNKYHIPILAMTADVIHATYDECVKCGMDGYVSKPFEEENLYQAVAKFFNPSDNSLQNGNRTT 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00003 992 Pfam His Kinase A (phospho-acceptor) domain 383 448 IPR003661 GO:0000155|GO:0007165
Pste3g00003 992 SMART CHASE_2 110 295 IPR006189 -
Pste3g00003 992 SMART HisKA_10 383 448 IPR003661 GO:0000155|GO:0007165
Pste3g00003 992 FunFam Histidine kinase 4 355 446 - -
Pste3g00003 992 Gene3D - 447 682 IPR036890 -
Pste3g00003 992 Gene3D - 839 982 - -
Pste3g00003 992 CDD HATPase_EvgS-ArcB-TorS-like 500 677 - -
Pste3g00003 992 ProSiteProfiles Histidine kinase domain profile. 390 679 IPR005467 -
Pste3g00003 992 CDD REC_hyHK_CKI1_RcsC-like 846 974 - -
Pste3g00003 992 Gene3D - 357 446 - -
Pste3g00003 992 FunFam Histidine kinase 4 114 329 - -
Pste3g00003 992 Pfam CHASE domain 113 293 IPR006189 -
Pste3g00003 992 SMART REC_2 844 974 IPR001789 GO:0000160
Pste3g00003 992 Coils Coil 360 380 - -
Pste3g00003 992 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 677 IPR003594 -
Pste3g00003 992 PANTHER TWO-COMPONENT HISTIDINE KINASE 25 975 - -
Pste3g00003 992 SUPERFAMILY CheY-like 843 979 IPR011006 -
Pste3g00003 992 Gene3D CHASE domain 114 329 IPR042240 -
Pste3g00003 992 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 368 449 IPR036097 GO:0000155|GO:0007165
Pste3g00003 992 SMART HKATPase_4 495 679 IPR003594 -
Pste3g00003 992 Gene3D - 61 113 - -
Pste3g00003 992 Coils Coil 433 453 - -
Pste3g00003 992 Pfam Response regulator receiver domain 846 974 IPR001789 GO:0000160
Pste3g00003 992 PRINTS Bacterial sensor protein C-terminal signature 622 632 IPR004358 GO:0016310|GO:0016772
Pste3g00003 992 PRINTS Bacterial sensor protein C-terminal signature 639 657 IPR004358 GO:0016310|GO:0016772
Pste3g00003 992 PRINTS Bacterial sensor protein C-terminal signature 604 618 IPR004358 GO:0016310|GO:0016772
Pste3g00003 992 PRINTS Bacterial sensor protein C-terminal signature 663 676 IPR004358 GO:0016310|GO:0016772
Pste3g00003 992 ProSiteProfiles Response regulatory domain profile. 845 978 IPR001789 GO:0000160
Pste3g00003 992 CDD HisKA 383 444 IPR003661 GO:0000155|GO:0007165
Pste3g00003 992 FunFam Histidine kinase 3 839 982 - -
Pste3g00003 992 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 437 674 IPR036890 -
Pste3g00003 992 ProSiteProfiles CHASE domain profile. 110 322 IPR006189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00003 Pste-Chr3 4715 12859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00003 13 981 Histidine Kinase Gene Family AT2G01830 69.200 0.0 1375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste3g00003 HATPase_c 1.7e-31 CL0025