Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03758 ATGAGCAACAACGCCTCCCGGAAGCGCGCGCCGCCGCCTTCGAAACCTCCTCCGGCGAAGCAAGCCATGATGACTCAGGAAGAAGAGTTCATGGATGAAGACGTGTTCCTAGACGAAACCCTCGTTTCCGAAGACGAAGAAGCTATCATTCTCCGCGACATCGAGCAGCGTCAGGCCCTCGCCGCGCGTCTCTCCAAGTGGACCCGTCCTCCTCTCTCCGCCGAGTATGTCGCGCAATCTCGTAGCGTCGTTTTTCAGCAGCTGGAGATTGATTACGTGATTGGAGAGAGTCACAAGGAATTGCTGCCGAACTCTTCTGGACCTGCCGCCATTATCAGAATCTTTGGAGTTACGAAGGAAGGACACAGTGTTTGCTGCAAAGTTCATGGGTTTGAACCATATTTCTACATCTGTTGCCCTCTTGGAATGGGTCCAGATGATATCGCCCACTTTCATCAAACTCTTGAGGGAAGGATGAGAGAAGCCAATAGAAACAGTAATGTGGGAAAATTTGTGCGCCGTATTGAAATGGTGCAGAGAAGGAGCATTATGTACTACCAGCCATCCAATTCTCAATCCTTTCTTAAAATTGTAGTTGCACTCCCAACAATGGTTGCCAGCTGCCGTGGTATTCTTGATAGGGGCATTCAGCTTGATGGTCTGGGAATGAAGAGCTTCTTGACTTATGAAAGCAATGTACTTTTTGCCCTTCGCTTCATGATTGATTGCAACATAGTTGGTGGAAATTGGATTGAAATTCCTGCTGGAAAATATAAGAAGACAGCGAAAAGCTTGTCTTACTGCCAGTTAGAGTTTGATTGCTTTCACGCTCCAGAAGGGGCATATTCAAAGATGGCTCCATTTCGCATTTTGAGTTTTGACATTGAGTGTGCTGGTCGTAAAGGTCATTTTCCTGAGCCTAGCCATGATCCTGTTATCCAGATTGCTAATTTGGTTACTTTACAAGGAGAAGACAAGCCACTTATTCAGAATGTGATGACCCTTAAATCATGTTCTCCTATTGTTGGTGTTGATGTGATGTCATTTGATACAGAAAGAGAAGTCCTTCTAGCTTGGAGGGATTTTATTCGTGAAGTAGACCCTGATATTATTATTGGATATAACATCTGCAAATTTGACTTGCCATATCTCATTGAGAGAGCTGTGAACCTGAAGATAGCAGAATTTCCAATTTTAGGTCGTATCAGGAACAGTAGAGTTCGAGTGAAGGATACGACTTTCTCATCAAGGCAGTATGGGACCAGGGAAAGTAAAGAAGTTACAGTAGAAGGGAGAGTTCAGTTTGATTTACTCCAGGTTATGCAAAGAGACTACAAATTAAGTTCTTATTCACTGAATTCTGTGTCAGCACATTTCCTTTCTGAGCAGAAAGAAGATGTTCATCATTCAATTATATCCGATCTTCAGAATGGAAATGCAGAAACTAGGAGGCGCCTTGCTGTGTATTGTTTGAAGGATGCATATCTCCCTCAGCGGCTTTTGGATAAATTGATGTTCATTTACAATTATGTGGAGATGGCTCGAGTAACAGGTGTCCCAATTTCTTTTCTACTTTCCAGAGGCCAAAGCATTAAAGTACTTTCTCAACTACTTAGGAAGGCAAGACAGAAGAATCTTGTCCTTCCTAATGTCAAACAGGCTGGATCTGAACAAGGAACATTTGAAGGTGCCACTGTATTGGAGGCAAGGGCTGGATTTTATGAAAAACCAATTGCTACTTTAGATTTTGCATCCCTGTATCCATCGATTATGATGGCCTATAATTTATGTTATTGCACTCTGGTGACTCCTGAAGATGCTCGCAAGCTCAACATCCCTCCAGAGTCTGTAAACAGAACTCCATCTGGTGAAACATTTGTTAAATCAAACTTGCAGAAGGGAATACTTCCTGAAATACTTGAAGAGCTATTAGCAGCTCGTAAAAGGGCAAAAGCAGACTTAAAGGAGGCAAAGGACCCCCTGGAGAAGGCAGTGCTAGATGGTAGACAACTGGCACTGAAAATTAGTGCAAATTCTGTGTATGGGTTTACGGGGGCTACCATTGGTCAGCTACCATGTTTAGAGATATCATCTAGTGTAACAAGCTATGGTCGACAAATGATTGAGCACACAAAAAAGCTTGTGGAAGATAAATTTACGACACTCAATGGCTATGAACACAAAGCTGAGGTAATATATGGAGACACAGATTCGGTCATGGTACAATTTGGTGTTTCCTCTGTAGAAGAGGCTATGAACTTAGGGAGAGAAGCTGCTGAATATATTAGTGGAACTTTCACAAAACCCATCAAACTGGAATTTGAGAAGGTTTACTATCCATATCTCTTGATTAGCAAGAAGAGATATGCTGGTTTGTTTTGGACAAAACCAGACAACTTTGACAAAATGGACACTAAAGGTATTGAAACGGTTCGAAGAGACAATTGTTTATTGGTCAAAAACCTGGTGAACGATTGCCTTCACAAAATACTGATTGACAGGGACGTTCCCGGGGCAGTCCAGTATGTTAAGAATGCTATTTCAGATCTTCTCATGAATCGAATGGACTTATCTCTTTTGGTTATTACAAAGGGTTTAACGAAGACAGGAGATGATTATGAAGTAAAGGCAGCACATGTTGAGCTTGCTGAAAGGATGCGCAAGCGAGATGCTGCCACTGCTCCAAATGTTGGAGATAGAGTACCTTATGTTATTGTTAAAGCTGCAAAAGGAGCAAAGGCATATGAGAGATCAGAGGATCCTATCTATGTGCTAGAGAACAACATACCGATAGATCCCCAATACTATCTTGAGAATCAAATTAGTAAGCCAATTCTGAGAATTTTTGAGCCAATTCTGAAGAATGCTAGCAAAGAACTTCTCCATGGAAGTCATACAAGATCCATTTCTATTTCTACTCCGTCAAACAGTGGCATATTGAAATTTGCTAAGAAACAGCTTACCTGCATTGGTTGTAAAGCTTTACTTGGCAAAGGTCTAAGCACTCTCTGTTCTCATTGCGAAGGAAGGGAAGCTGAGCTGTACTGTAAAACAGTAGCTCAAGTATCCGAGCTGGAGATGCTTTTCGGAAGGTTGTGGACACAATGTCAAGAGTGCCAAGGTTCACTTCATCAGGATGTTCTCTGCACAAGTCGGGATTGTCCAATTTTTTATCGACGGAAAAAGGCACAGAAAGATATGGCTGAAGCAAAGGTGCAATTGGATCGATGGAACTTCTAA 3240 0.4231 MSNNASRKRAPPPSKPPPAKQAMMTQEEEFMDEDVFLDETLVSEDEEAIILRDIEQRQALAARLSKWTRPPLSAEYVAQSRSVVFQQLEIDYVIGESHKELLPNSSGPAAIIRIFGVTKEGHSVCCKVHGFEPYFYICCPLGMGPDDIAHFHQTLEGRMREANRNSNVGKFVRRIEMVQRRSIMYYQPSNSQSFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFLTYESNVLFALRFMIDCNIVGGNWIEIPAGKYKKTAKSLSYCQLEFDCFHAPEGAYSKMAPFRILSFDIECAGRKGHFPEPSHDPVIQIANLVTLQGEDKPLIQNVMTLKSCSPIVGVDVMSFDTEREVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAVNLKIAEFPILGRIRNSRVRVKDTTFSSRQYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKARQKNLVLPNVKQAGSEQGTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDARKLNIPPESVNRTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLNGYEHKAEVIYGDTDSVMVQFGVSSVEEAMNLGREAAEYISGTFTKPIKLEFEKVYYPYLLISKKRYAGLFWTKPDNFDKMDTKGIETVRRDNCLLVKNLVNDCLHKILIDRDVPGAVQYVKNAISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIVKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPILRIFEPILKNASKELLHGSHTRSISISTPSNSGILKFAKKQLTCIGCKALLGKGLSTLCSHCEGREAELYCKTVAQVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKVQLDRWNF 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03758 1079 Gene3D Palm domain of DNA polymerase 561 790 IPR023211 -
Pste2g03758 1079 Gene3D DNA Polymerase, chain B, domain 1 88 264 - -
Pste2g03758 1079 SMART polmehr3 286 745 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pste2g03758 1079 Pfam DNA polymerase family B 519 952 IPR006134 GO:0000166|GO:0003677
Pste2g03758 1079 FunFam DNA polymerase 807 963 - -
Pste2g03758 1079 Pfam DNA polymerase family B, exonuclease domain 118 455 IPR006133 -
Pste2g03758 1079 Pfam C4-type zinc-finger of DNA polymerase delta 989 1060 IPR025687 -
Pste2g03758 1079 PRINTS DNA-directed DNA-polymerase family B signature 578 591 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pste2g03758 1079 PRINTS DNA-directed DNA-polymerase family B signature 670 682 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pste2g03758 1079 PRINTS DNA-directed DNA-polymerase family B signature 731 739 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pste2g03758 1079 Gene3D - 807 962 IPR042087 -
Pste2g03758 1079 FunFam DNA polymerase 326 559 - -
Pste2g03758 1079 Gene3D Helix hairpin bin 634 686 - -
Pste2g03758 1079 FunFam DNA polymerase 634 686 - -
Pste2g03758 1079 ProSitePatterns DNA polymerase family B signature. 733 741 IPR017964 GO:0000166|GO:0003676
Pste2g03758 1079 SUPERFAMILY Ribonuclease H-like 109 525 IPR012337 -
Pste2g03758 1079 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 68 1045 - -
Pste2g03758 1079 Gene3D - 287 505 IPR036397 GO:0003676
Pste2g03758 1079 MobiDBLite consensus disorder prediction 1 25 - -
Pste2g03758 1079 FunFam DNA polymerase 89 264 - -
Pste2g03758 1079 CDD POLBc_delta 560 953 - -
Pste2g03758 1079 CDD DNA_polB_delta_exo 282 511 - -
Pste2g03758 1079 NCBIfam DNA polymerase (pol2) 340 950 - -
Pste2g03758 1079 SUPERFAMILY DNA/RNA polymerases 544 954 IPR043502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03758 Pste-Chr2 42261886 42276736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03758 5 1079 Core DNA Replication Machinery Family AT5G63960 80.836 0.0 1858