Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03734 ATGAAGATAAAATCCCATTTTTCCTTCTTGCTGGTGATTTTTATAGCCATTATCCGTACAAACGTTTCTTTAGCAGAATGTGATAATGTGAAGGACTATTGCCCTACAATAGCACCCGAAAAGCAGGCCATATTCATCAATGGCCTACCCTGCGAGAACCCAGATAACACAATAGCCCATGATTTCAAGAGCATGGAATTAAGCAAGCCTGGTTCCAGAGACGATTTTGGTTCATTGGTTAAAATTGTTACTGCTTCCAAGTTTACTGGGCTCAACACTCTTGGCCTCTCAATTGGAAGAAGTGACATAGAAGTGGATGGGATGGTGAATCTCCACAATCACCCAAGAGCCACTGAGATGATATATGTAAGTGAAGGTACGCTGGTGGCTGCGTTTCTCAACACCCAAAACCAACTCTTCCAAAAGATTCTGAAACCCGGTGATGTGTTTGTGATCCCCAAGGGCTTGTTTCACTTCTTCCTTAATCGTGGTGCACAAGTTGCAACTGTGTTCTCCGTTTTCAACAGCCAAAATCCCGGGCTGGGCTCCCTCTCTTCCCTTCCCTCTCACACATTGGAATCGCTTGACAACATAAAGAAGAAGCTTAACTCACTCTCTCACTCAGAACTTGTTGGCGTTAACGACTTAACTTCGCCTGTGTTGGATATCATCTATGTTTCTAGTTTTATGACAATATATATGCAAGGTGCTTTAACCAGGCCACAGCATCAATTACATGCTCAAGGGTCAGGATTTTAG 759 0.4321 MKIKSHFSFLLVIFIAIIRTNVSLAECDNVKDYCPTIAPEKQAIFINGLPCENPDNTIAHDFKSMELSKPGSRDDFGSLVKIVTASKFTGLNTLGLSIGRSDIEVDGMVNLHNHPRATEMIYVSEGTLVAAFLNTQNQLFQKILKPGDVFVIPKGLFHFFLNRGAQVATVFSVFNSQNPGLGSLSSLPSHTLESLDNIKKKLNSLSHSELVGVNDLTSPVLDIIYVSSFMTIYMQGALTRPQHQLHAQGSGF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03734 252 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 24 184 - -
Pste2g03734 252 PRINTS Germin signature 112 132 IPR001929 GO:0030145
Pste2g03734 252 PRINTS Germin signature 142 162 IPR001929 GO:0030145
Pste2g03734 252 PRINTS Germin signature 175 190 IPR001929 GO:0030145
Pste2g03734 252 Gene3D Jelly Rolls 25 209 IPR014710 -
Pste2g03734 252 SMART Cupin_1_3 65 204 IPR006045 -
Pste2g03734 252 CDD cupin_OxOx 28 186 IPR001929 GO:0030145
Pste2g03734 252 ProSitePatterns Germin family signature. 107 120 IPR019780 GO:0030145
Pste2g03734 252 Pfam Cupin 76 199 IPR006045 -
Pste2g03734 252 SUPERFAMILY RmlC-like cupins 70 188 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03734 Pste-Chr2 41456668 41457533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03734 29 181 Miscellaneous Gene Families AT1G72610 38.961 3.52e-31 112