Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03715 GGGAACCAAAACCAATGGATTCCATGGTTTTTCTTTCTCGTACAAGTTTGATATCTTTTAACCTCAGATACGACAATTCTTCTTCATTGGTGCACTATATATATTCCACAGAAACCAACCCATTTCTGCACTGCAAAAAGAGAAAAGTACTTGTGTGTTCGTGTGTGTGTACTAATCAAAAAGTCATCAAGGAGTTTAAAAGCCAAGAAAATGGCTTCAAAGACTGCTGGAAAGGTCATACGCTGCAAAGCAAGATAGTAGTGCTCTCAATTTCTCACATTAGAAGTTACTTTAAAGCTGCGGTGGCATGGGAAGCCGGAAAACCATTGGTGATGGAGGAAGTTGAGGTAGCTCCACCTCAGGCAAATGAGGTTCGTCTCAAGATCTTGTTCACCGCTCTCTGCCACACTGATGTATACTTCTGGGAAGCCAAGGGACAGACACCTTTATTTCCACGGTTATTTGGTCATGAAGCAGGAGGAGTTGTGGAAAGTGTAGGTGAGGGTGTGACGGATCTCAAACCTGGTGATCATGTGCTTCCAGTTTTCACTGGGGAGTGCAAGGAGTGTGCTCATTGCAAATCAGAGGAAAGTAACATGTGTGACCTCCTGAGGATTAACACTGACCGTGGAGTGATGCTGAATGATGGCAAGTCAAGGTTTTCAATCAATGGACAACCAATATACCACTTTGTGGGAACCTCCACCTTTAGTGAATACACAGTAGTACATGTTGGCTGTGTTGCCAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTGTTCTGAGTTGTGGAATCTCAACAGGTCTTGGTGCTACACTAAATGTTGCAAAACCATACAAAGGTTCATCAGTGGCTGTATTTGGATTAGGAGCCGTTGGGCTTGCTGCCGCTGAAGGAGCTAGACTTGCTGGAGCTTCCAGGATAATTGGAGTTGACTTGAATCCTAAGCGATTTGCTGAAGCTAAGAAGTTTGGAGTTACTGAGTTTGTGAATCCAAAAGATTATGACAAGCCGGTTCAAGAGGTGATTGTTGAAATGACTAATGGGGGAGTTGACCGAAGTGTTGAGTGTACCGGAAGTATCAGTGCTATGATCTCTGCATTCGAATGTGTGCATGATGGATGGGGTGTTGCTGTACTTGTTGGTGTGCCAAATAAAGATGATGCTTTCAAAACTCATCCTATTAATCTCTTGAACGAAAAGACTATCAAGGGCACTTTCTTTGGCAACTATAAACCTCGTTCTGATCTCCCATCTGTGGTGGAAATGTACATGAACAAGGAACTTGAACTGGAGAAATTTATCACCCATGAAGTACCTTTTGAAGAAATCAACAAAGCCTTTGAATACATGCTTAAAGGGGAGAGCTTGCGTTGCATAATGCGCATGAGTGCATAGAATTTATTTAAACAGCTATTTGAGAGGTGGAAATAAAATAAAATACTTGAGCGTGTATATAGCTGTGATCACTGTAACAAAACATTCATAAGTTTTGCTTTAAATTTCGCAGGGGAGTTTTTATATTTCTTGTAAATCTCGCGTTTGTACCAATAAAACAAGCTAGTCATGTACAGATGTACTTTTATATATGTATTATATACTTCATTGTCGAGTGGATTGAAGTTGAACATCTTTATATACGTTGG 1651 0.4125 MDSMVFLSRTSLISFNLRYDNSSSLVHYIYSTETNPFLHCKKRKVLVCSCVCTNQKVIKEFKSQENGFKDCWKGHTLQSKIVVLSISHIRSYFKAAVAWEAGKPLVMEEVEVAPPQANEVRLKILFTALCHTDVYFWEAKGQTPLFPRLFGHEAGGVVESVGEGVTDLKPGDHVLPVFTGECKECAHCKSEESNMCDLLRINTDRGVMLNDGKSRFSINGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGISTGLGATLNVAKPYKGSSVAVFGLGAVGLAAAEGARLAGASRIIGVDLNPKRFAEAKKFGVTEFVNPKDYDKPVQEVIVEMTNGGVDRSVECTGSISAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPINLLNEKTIKGTFFGNYKPRSDLPSVVEMYMNKELELEKFITHEVPFEEINKAFEYMLKGESLRCIMRMSA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03715 462 Pfam Zinc-binding dehydrogenase 288 418 IPR013149 -
Pste2g03715 462 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 251 424 IPR036291 -
Pste2g03715 462 CDD alcohol_DH_plants 94 459 - -
Pste2g03715 462 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 151 165 IPR002328 GO:0008270|GO:0016491
Pste2g03715 462 Pfam Alcohol dehydrogenase GroES-like domain 118 243 IPR013154 -
Pste2g03715 462 SUPERFAMILY GroES-like 410 458 IPR011032 -
Pste2g03715 462 FunFam alcohol dehydrogenase 1-like isoform X1 101 264 - -
Pste2g03715 462 Gene3D - 265 403 - -
Pste2g03715 462 FunFam Alcohol dehydrogenase class-P 265 403 - -
Pste2g03715 462 PANTHER ALCOHOL DEHYDROGENASE 94 458 - -
Pste2g03715 462 Gene3D - 101 452 - -
Pste2g03715 462 SUPERFAMILY GroES-like 93 268 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03715 Pste-Chr2 40976614 40980240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03715 118 452 Monolignol Biosynthesis Gene Families AT1G72680 25.294 8.65e-13 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03715 2 40976614 40980240 Pste2g03715 2 40976614 40980240 ECH