Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03712 GCTCATTTCATTTCTTTCTCTCGCAGCTTCGACGTGGCAGATTCACATGCTCCACTCTAGGGTTTCGCTCTCCACCCTCTGTTTCTCACTCACTTAGAACACTGCATTTGTCAAAGAGAAGAATAACTGTTTTGGCAAGTGAGATGAGGGGAAGTGGCAAAAAGCGCTCTTCAAAGTGGGATTTGAGAGATGATCCTGAATTTTCACCTGATGATAGTAAGCAATTGCGGTCTGGGTGGTCCTCTGCAGATGGTGCTGGTAGCAATAGTTCAAAGTGGTCTTATTCAGAAGGCAGTGATAAACTAAAGCATGGTATGACATTTTCATCCAAGGAACCTTTTCCTGGAAGCAGAGGTACAAATAAGGATGATGTTATGAATAAAGACTACGGAATTCTGAATGAAACAATGGAATGGGATGAGGATGGAAGTTATGACAAGAAAATGTCTCCTGGGCCTGAGGAATGGAAACATAAGAGACATAGTCAATCCCCCAAAAATGGTTGGAACCGGTCAGTCAGGAGTAGTCGAAGCAGGAGTCCTCCTCATGGTTTTAGGTGGGATTCTGGAGTCAATGACAGAACTAGAATGCGGGCTGGAGGATCAACACAACCATGTAGAGATTTTGCTGCTGGTAAATGCAGAAGAGGCAGCCAATGCCTTTTTCTTCATCATGATAATCAAAATCACGAAGATAGCTGGGAAAATAAGTGCAGGGAAGATGGAGCTCCTAGATACTCTGTTCCATATGAAAGTAGAGACTATTCTCATAAAAGTGGTAGATCTAATGAAGCTTGTGCTAATTTTGCAAAAGGCAGGTGTAGAATGGGAGCATCATGCAAGTTTGTGCATCATAGCAATTCTGATGGACATGGTAAAGTATCTGTGGATGAATTAACTAGAGAGAGGGAAATTGATAGAAGGCCCCGGGATAGTTCCTTTGAGCAGGGTGGCGGGCATGGGCCCAACCGCGGTGGGGATACACTTTGCAAATTTTTTGCTAATGGGAATTGTCGTAATGGTAAACATTGTAGGTTTTCTCATGATAGGCAAGCATGTAGGAGCCCTAATAGAAGATTAAGAGATGATAGGTGGGCTAGCAATCCTGGGGGAGATCACCGTAGGATGGATAGACCGAAATTGAATGATTCAGTTAGTCCTAATAGGAGGCCAAGGGATGATAGGTGGTGTTCAGACGGTAACAAGGTTGATGCAGATAACGTTTGGGACAGTCCAAAGCAGAATGATACAGTTGTTGTCTCTGATACAGCAAAGCTGGTTGAGGACAAAAGTGAAAATGTGGGTGCTACAGAGCAAGGATTGACTCCTTTGCCTACGAGGGATGGATGGGGTCATAGTTTGGATAAGAGCAGAGTGCATGGTGAACAAGCATTTTCAAGTGATAAGAAGGAATCTGAGAGTTGGATAGCAGGAAATACTACTGCCAACATGCATGGTTCCCAGTCATTAGTTACAGAGATTTGGTTGGGTGATGAAAAAATGTCACCTGATTGGGATTACAAGGTAGGAACTTCCAGCCGTATTGAAGAAAAACATGAACAAAATAAGCATGGGATAGCAAAGGGTGGTCTGTATTCAGCCACCTCTGAACATGACAGAATACAAATTGCTCCAGGACAAGGTTTTACTCAGAATGCAGAGAGTTTGAATCCTTTGCATTCTTCAAATAAACAAGCAGTTGGACAAAGTCAAGTAACTGCTCCTGTTCTACCTTCAAAAGGGAAAATTTTAGATTGTATGCCAAACCAGGCAGTATCTACAGAGAAAAAGTACGCTGCTGAACAAAATATTATCATGGATGCAGGATTATCACAAGTGAATTTAAGAAATCCTCCTCCAATTGAGAATGTGGTAGGCAAAGAACAGCTTGCTCAGCTTACCAATCTCTCAGCCTCTCTGGTGCATATCCTTGGGACAGGGCAACAGCTGCCACAACTTTATGCTGCCTTAAATTATCAGGATGCAAATGACACATCCTCCCTAGCAAAAACTGAGATGCCTGCTATGCCTGTTTCCAATACATTTGTCAAGCCAGATCCTGCTGTTGGACTGCCAAAGCAGTATGATCCAATGTGTGACATTGTTGAGCCAAAGAGTGCTGTTGCAAGTGGGGTGCTCCCATCCATGCCTTCAAGTAAAAATGTTGCAGAAGATGTCGTGGAAATTCCATCACAGTTGTCCAACACAGCAAGACAAAATTCTGGCAATTCTTCCAAGCCTTCTGGCTCAAAAGAACTTGTCAAGAGTGATCCTCTAACCCAGTTGCAGCCAGGTCAAAACACTGAGGTCAGTAAGGATAATAACTGGGAAATGTTACCTGAGGAAAGGCAAAAATCGCAAGATGATCCTAAAAGCACCAAAAAGAATGGTCCTTTGGGAAATATGGAGCAAACTGGTGGTCCTGATGAGGCCAAGAAAACAAAGGATATGAAGGGGAGTCGAGCATTTAAATTTGCATTGGTTGAGTTTGTTAAGGAGCTTCTTAAACCAACATGGAAAGAAGGTCAAATTACCAAAGAAGATTATAAAACAATTGTCAAGAAAGTGGTTGATAAAGTAACTGGTACCATGCAGGGGGCCAATATTCCTCAGACCCAAGAGAAAATTGATCAGTATTTGTCATTTTCAAAACCGAAGCTTAACAAACTTGTACAGGCGTATGTGGAAAAGATTCAGAAGGCATAGGGCAATTATAGAAATTAAACTGCCAACTCTATCGTTTATATTCTCAGAATTGTGGTCTTCAACATGTATTCAGCTTCTTTACCTTTGGGGTTTTTTGTCGTGGCCATTTGTTTGTGTACTTTAGCTCCTTTTCAATAGTTAGGCAGTTATGTGGGATTCAATTTGTTTTGCCAGTTTATTGTGTAATTACAGTAGACAGCTGTTTGTTTTTCAGAACAGTGAGAAAGACAATGGAACCAAAAGATGCTAATGTCCAATGCATGATTATTTCAAACTGG 2983 0.4194 MRGSGKKRSSKWDLRDDPEFSPDDSKQLRSGWSSADGAGSNSSKWSYSEGSDKLKHGMTFSSKEPFPGSRGTNKDDVMNKDYGILNETMEWDEDGSYDKKMSPGPEEWKHKRHSQSPKNGWNRSVRSSRSRSPPHGFRWDSGVNDRTRMRAGGSTQPCRDFAAGKCRRGSQCLFLHHDNQNHEDSWENKCREDGAPRYSVPYESRDYSHKSGRSNEACANFAKGRCRMGASCKFVHHSNSDGHGKVSVDELTREREIDRRPRDSSFEQGGGHGPNRGGDTLCKFFANGNCRNGKHCRFSHDRQACRSPNRRLRDDRWASNPGGDHRRMDRPKLNDSVSPNRRPRDDRWCSDGNKVDADNVWDSPKQNDTVVVSDTAKLVEDKSENVGATEQGLTPLPTRDGWGHSLDKSRVHGEQAFSSDKKESESWIAGNTTANMHGSQSLVTEIWLGDEKMSPDWDYKVGTSSRIEEKHEQNKHGIAKGGLYSATSEHDRIQIAPGQGFTQNAESLNPLHSSNKQAVGQSQVTAPVLPSKGKILDCMPNQAVSTEKKYAAEQNIIMDAGLSQVNLRNPPPIENVVGKEQLAQLTNLSASLVHILGTGQQLPQLYAALNYQDANDTSSLAKTEMPAMPVSNTFVKPDPAVGLPKQYDPMCDIVEPKSAVASGVLPSMPSSKNVAEDVVEIPSQLSNTARQNSGNSSKPSGSKELVKSDPLTQLQPGQNTEVSKDNNWEMLPEERQKSQDDPKSTKKNGPLGNMEQTGGPDEAKKTKDMKGSRAFKFALVEFVKELLKPTWKEGQITKEDYKTIVKKVVDKVTGTMQGANIPQTQEKIDQYLSFSKPKLNKLVQAYVEKIQKA 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03712 853 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 852 - -
Pste2g03712 853 Pfam RNA-binding, Nab2-type zinc finger 217 236 - -
Pste2g03712 853 MobiDBLite consensus disorder prediction 685 726 - -
Pste2g03712 853 MobiDBLite consensus disorder prediction 301 353 - -
Pste2g03712 853 Gene3D - 273 354 - -
Pste2g03712 853 MobiDBLite consensus disorder prediction 26 48 - -
Pste2g03712 853 SUPERFAMILY CCCH zinc finger 279 301 IPR036855 GO:0046872
Pste2g03712 853 ProSiteProfiles Zinc finger C3H1-type profile. 152 179 IPR000571 GO:0046872
Pste2g03712 853 MobiDBLite consensus disorder prediction 301 365 - -
Pste2g03712 853 MobiDBLite consensus disorder prediction 727 744 - -
Pste2g03712 853 SMART c3hfinal6 213 238 IPR000571 GO:0046872
Pste2g03712 853 SMART c3hfinal6 276 302 IPR000571 GO:0046872
Pste2g03712 853 SMART c3hfinal6 152 178 IPR000571 GO:0046872
Pste2g03712 853 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 155 177 IPR000571 GO:0046872
Pste2g03712 853 MobiDBLite consensus disorder prediction 1 24 - -
Pste2g03712 853 ProSiteProfiles Zinc finger C3H1-type profile. 276 303 IPR000571 GO:0046872
Pste2g03712 853 MobiDBLite consensus disorder prediction 685 769 - -
Pste2g03712 853 ProSiteProfiles Zinc finger C3H1-type profile. 212 239 IPR000571 GO:0046872
Pste2g03712 853 MobiDBLite consensus disorder prediction 92 114 - -
Pste2g03712 853 MobiDBLite consensus disorder prediction 1 156 - -
Pste2g03712 853 MobiDBLite consensus disorder prediction 382 401 - -
Pste2g03712 853 MobiDBLite consensus disorder prediction 237 274 - -
Pste2g03712 853 Pfam CCCH-type zinc finger 281 301 IPR041367 -
Pste2g03712 853 MobiDBLite consensus disorder prediction 238 266 - -
Pste2g03712 853 Gene3D - 153 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03712 Pste-Chr2 40907116 40914572 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste2g03712 zf-CCCH 2.7e-05 CL0537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03712 2 40907116 40914572 Pste2g03712 2 40907116 40914572 ECH