Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03711 ATGGGAAAACCCACTAAACCCATCCTTTCATTCACAATCTCAATCCTCAGATCCACTCTCCTCCTCCTCTCCATGGCGTCCATCTTCCTCATCTTCCTCTTCTTGGTCCTTCACTCCCACCCTGACTCCGCCATGGAGATCCGACAAGCATGCAGGGCAACGCGCTTCCCTGAACAATGCGAAGCCTCTCTACAGCTCCAGCTCCCCTTCAACCCCACCCCTGTGGAAATCATCCAATCGGCCATCAGCATCTCGGCAGCGAAACTCGTTGTGGCCCAGTCCATGGTCCACTCGATCGTGGAGGCCTCCAGGGACAACCACACCCGCAGCAGCGCCGCCAAGAGCTGCCTCCAAGTCCTCCACTACTCCCAACACCGCACCTCCCTGGCTTCCCTGGCCCTCCCCCGCGGCGCAACCGAAGACGCCCGCGCCTGGATGAGCGCCGCCCTCGGCTACCAGTACGGGTGCTGGTCCGGCCTCAGTTACATCAACCACACCTCTCTGGTTGCCCAAACCATGTCCTTCATGGACTCCCTCCTCACTCTCTCCAGCAACGCTCTCTCCATGATGCTTTCCTACCACCTCTTCGGAAACCACACCGCTTCCTGGAGGCCCCCCATCACCGAGCGCCACGGCTTCTGGGACCCCCATGCCTCCCGTGGATTCGGCCCCGGCCCCAACATTCCCCTCACATTCACCCCCAACCTTACCGTCTGTAAGGGCAATCACCCTCGCTGTTATGCCACCGTTCAGGCAGCCGTTAATGCCGCTCCCCATGACTCTCAACGCAGGTTTGTCATCTACATTAAGGAGGGCCTCTATGTGGAGAGGGTCAGGGTTCCCTTGCGGAAGAAGAATCTCGTCTTCCTCGGTGATGGCATGGGCAAGACTGTCATCTCCGGTTCTGCCAACGTCGCCCACCCCGGAATCACAACCTATAGCTCTGCCACTCTAGGGGTTGCTGGGGATGGATTTATAGCAAAGGATCTGACCATCCAGAACACGGCTGGTCCTAATGCTCACCAAGCAGTGGCCTTTCGATCAGACAGTGATCTTTCTGTGATTCACAACTGTGAATTCATAGGCAATCAGGATACTCTTTATGCTCATTCCCTTCGCCAATTTTATAAATCTTGCCGCATAATCGGCAATGTGGACTTCATCTTTGGCAACTCAGCCTCCATCTTCCAAGACTGTGAAATCCTAGTCCGGCCCAGGCAAGCCAAGCCAGACAAGGGAGAAACCAATGCCGTTACCGCCCACGGCAGGACAGACCCTGCTCAGTCGACTGGATTTGTTTTCCAGAACTGCATCATTAATGGTACCGACGAATACATGGCATTGTACTATAGCAAGCCTAAAGTTCACAGGAACTATCTGGGGAGGCCATGGAAGGAGTATTCTAGAACAATTTTCATCCGTTCGTTCATGGAATCCCTTATCATACCGCAGGGTTGGATGCCATGGAGTGGGGATTTTGCACTCGACACTCTTTATTATGGGGAATTTGAGAACTCCGGACCTGGTTCTAATCTCACTCAGAGGGTGCCCTGGAGTAGCCAGGTCCCACCCGAGCATGTGTTCTCCTATTCAGTGCAGAATTTCATTCAAGGAGATGATTGGAATCATAATCTCAGTTATTAG 1644 0.542 MGKPTKPILSFTISILRSTLLLLSMASIFLIFLFLVLHSHPDSAMEIRQACRATRFPEQCEASLQLQLPFNPTPVEIIQSAISISAAKLVVAQSMVHSIVEASRDNHTRSSAAKSCLQVLHYSQHRTSLASLALPRGATEDARAWMSAALGYQYGCWSGLSYINHTSLVAQTMSFMDSLLTLSSNALSMMLSYHLFGNHTASWRPPITERHGFWDPHASRGFGPGPNIPLTFTPNLTVCKGNHPRCYATVQAAVNAAPHDSQRRFVIYIKEGLYVERVRVPLRKKNLVFLGDGMGKTVISGSANVAHPGITTYSSATLGVAGDGFIAKDLTIQNTAGPNAHQAVAFRSDSDLSVIHNCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSASIFQDCEILVRPRQAKPDKGETNAVTAHGRTDPAQSTGFVFQNCIINGTDEYMALYYSKPKVHRNYLGRPWKEYSRTIFIRSFMESLIIPQGWMPWSGDFALDTLYYGEFENSGPGSNLTQRVPWSSQVPPEHVFSYSVQNFIQGDDWNHNLSY 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03711 547 Gene3D - 230 547 IPR012334 -
Pste2g03711 547 PANTHER PECTINESTERASE 28 541 - -
Pste2g03711 547 NCBIfam pectinesterase inhibitor domain 26 190 IPR006501 GO:0004857
Pste2g03711 547 SMART PMEI_2 42 189 IPR006501 GO:0004857
Pste2g03711 547 FunFam Probable pectinesterase/pectinesterase inhibitor 51 45 192 - -
Pste2g03711 547 FunFam Pectinesterase 230 547 - -
Pste2g03711 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 189 IPR035513 -
Pste2g03711 547 Pfam Pectinesterase 238 539 IPR000070 GO:0030599|GO:0042545
Pste2g03711 547 SUPERFAMILY Pectin lyase-like 231 543 IPR011050 -
Pste2g03711 547 Pfam Plant invertase/pectin methylesterase inhibitor 47 189 IPR006501 GO:0004857
Pste2g03711 547 CDD PMEI-like_3 50 190 - -
Pste2g03711 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 192 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03711 Pste-Chr2 40862838 40864552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03711 44 541 Carbohydrate Esterase AT5G09760 62.919 0.0 663