Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste2g03708 | CAACAATTTTCATTTCCCCCTCGCCACACTTCACACCATTCTCGCTCCTCCTCCTCTCCACCTCAGAAAAAAACCGTTTCTTCTGAAATTCCAATTCTGCCCTCCTGGCTTTGCGAATTTACCAATCCGCCATGGCTCCTCCAGCCACCTCGTCCTCATCGCCTTCGGCTCAGAGGCAAGTCGGCTTCAGCCGGCGCACGCAGGCACAGGAGCCGCGCCAGAATGAGGACGACGAGGACTCGCCGCCGAGGAAGTACCGGCTGATGACGGACATAATGGCGTGCGCGCGACACGCCGTGGTTGAAAGAGAGAGTTACAGTGACCTTTTATGTGACCAATGCGGCTCCGGCGAGCTGCCGGAGGAGCTGCTTCTCTGCGACAAATGCGACAAAGGCTTCCACATGAAATGCGTGAGGCCAATCGTCGTCAGGGTTCCGATTGGATCCTGGCTTTGCCCTAAGTGTCAAGGAGGGAAACGAGTGCGGACTTTCTCTCAGAAGAAGATAATTGATTTCTTCGGGATTCGGAGGACTTCTGATGGTGCTAATGACAAGCGTTCTTCTCGGGATGCTAAGAAGCGTCGGAAACGTTCGCGACCTCTTGTATTACATAAGAAAAAGAGGAGATTGTTACCATTCGTTCCTACTAAAGATACTGCCCAGAGATTGAAGCAGATGGGTTCCCTTGCTTCTGCTTTAACAGCATCAAATATGAAATTCTGTGATCATCTCACATACTTGCCTGGAATGGCTCCTAGATCTGCAAATCAAGCTACACTAGAAAACGGTGGCATGCAGACTCTTTCCAAGGAAGACATGGAGGCCCTAGAACAATGCATTGCTATGTCTAAAAGAGGCGAATTCCCTCCCTTTATGGTTGTTTATGATTCTCGTGAAGGTTATACTGTTGAGGCTGATGACCTGATCAAGGATATGACAATTATTGCTGAATACACTGGCGATGTAGATTACCTTGACAACCGGGAAAATGATGATTGTGACAGTATGATGACCCTTCTTCTTGGATCAGAAAAAACTCAAAATCTTGTTATCTGTGCTGATAAACGTGGAAACATTGCTCGCTTTATCAGTGGCATAAACAATCATACACAGGAAGGTAGGAAAAAGCAGAACTGTAAATGTGTGAGATACAATGTTGATGGTGAATGCAGGGTCTTTTTGGTTGCTACACGTGATATTAATAAGGGAGAAAGGCTTTATTATGATTATAATGGTCATGAGTATCAATACCCGACTCATCATTTTGTTTGAGTGAAAGGCATAAATACCTCCTAAAAATTCTATAGAACTGGGACACAATTTTAGATCCTCGGGAAAGGATTTTATTCATATTGTTGAAAATTTCAACTCATTGTTGTTGCAGATTCAACAATTTTTTCTTAAATTATCATCATGGGCAATTCACTGTAATTTATGCTGTAGAGCTGCCCAATCATGTGGCTTAGGGTAGAATAGAGTACCTTAGGAAAACTTTATTCATTTAGGTTATATCTCAGAAGATGAGATATACATTTTTT | 1537 | 0.4411 | MAPPATSSSSPSAQRQVGFSRRTQAQEPRQNEDDEDSPPRKYRLMTDIMACARHAVVERESYSDLLCDQCGSGELPEELLLCDKCDKGFHMKCVRPIVVRVPIGSWLCPKCQGGKRVRTFSQKKIIDFFGIRRTSDGANDKRSSRDAKKRRKRSRPLVLHKKKRRLLPFVPTKDTAQRLKQMGSLASALTASNMKFCDHLTYLPGMAPRSANQATLENGGMQTLSKEDMEALEQCIAMSKRGEFPPFMVVYDSREGYTVEADDLIKDMTIIAEYTGDVDYLDNRENDDCDSMMTLLLGSEKTQNLVICADKRGNIARFISGINNHTQEGRKKQNCKCVRYNVDGECRVFLVATRDINKGERLYYDYNGHEYQYPTHHFV | 379 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste2g03708 | 379 | CDD | SET_ATXR5_6-like | 242 | 379 | - | - | |
Pste2g03708 | 379 | SMART | set_7 | 246 | 373 | IPR001214 | GO:0005515 | |
Pste2g03708 | 379 | PANTHER | N-LYSINE METHYLTRANSFERASE KMT5A | 142 | 377 | - | - | |
Pste2g03708 | 379 | FunFam | Histone-lysine N-methyltransferase ATXR5 | 150 | 379 | - | - | |
Pste2g03708 | 379 | ProSiteProfiles | SET domain profile. | 245 | 367 | IPR001214 | GO:0005515 | |
Pste2g03708 | 379 | Pfam | PHD-finger | 67 | 112 | IPR019787 | - | |
Pste2g03708 | 379 | MobiDBLite | consensus disorder prediction | 26 | 40 | - | - | |
Pste2g03708 | 379 | CDD | PHD_RSF1 | 66 | 111 | - | - | |
Pste2g03708 | 379 | Pfam | SET domain | 243 | 367 | IPR001214 | GO:0005515 | |
Pste2g03708 | 379 | SUPERFAMILY | FYVE/PHD zinc finger | 52 | 112 | IPR011011 | - | |
Pste2g03708 | 379 | Gene3D | SET domain | 150 | 379 | IPR046341 | - | |
Pste2g03708 | 379 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 13 | 125 | IPR013083 | - | |
Pste2g03708 | 379 | SMART | PHD_3 | 66 | 112 | IPR001965 | - | |
Pste2g03708 | 379 | MobiDBLite | consensus disorder prediction | 136 | 157 | - | - | |
Pste2g03708 | 379 | ProSitePatterns | Zinc finger PHD-type signature. | 67 | 111 | IPR019786 | - | |
Pste2g03708 | 379 | SUPERFAMILY | SET domain | 239 | 370 | IPR046341 | - | |
Pste2g03708 | 379 | ProSiteProfiles | Zinc finger PHD-type profile. | 64 | 114 | IPR019787 | - | |
Pste2g03708 | 379 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Pste2g03708 | 379 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste2g03708 | Pste-Chr2 | 40793422 | 40797759 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste2g03708 | 30 | 136 | C2H2 Transcription Factor Family | AT3G01460 | 32.520 | 1.18e-08 | 55.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Pste2g03708 | SET | 2.7e-06 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste2g03708 | 2 | 40793422 | 40797759 | Pste2g03708 | 2 | 40793422 | 40797759 | ECH |