Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03705 ATGGTGAGGGCCAGAGACGATTTATGCATAACCGTTCCCAGTTTCTTCAAGTGCCCAATCTCCATGGATGTCATGAAATCCCCTGTGAGTCTCTGCACCGGAATCACCTACGACCGCTCCAGCATCCAACGCTGGCTCGACGCCGGCAACAACACCTGCCCTGCTACCATGCAGCTTCTCCAAACCAAAGACTTGGTTCCCAATCGCACACTTCAAAGCCTCATCCAAATCTGGTCCCACTCCGTTCGCCCTCCAACCCCTCCCCCTTCCTCCGACCAACTCCTCCAAACCATCGCCCACTTGGAATCCCACTCCCTCCGCTTTGCTTCTCTCTCCAAACTGCTCCACTTCGCCGCTGCTTCTCATCAAAACAAACTCTTACTTGCCAAAACGCAAAACTTCGTCCACCGACTCCTTCGTTTCCTCCACACTGGCGTAACCACCACCACTACTCTTCAATTTCTTCAACAGCTCTTGCTTCTGCTATGTTTGCTTCTCGATACCATTGAAGATTCCCAGGCTTTCAAAAACTCTATGTTGAAAGAAAACAAACACTGCCTAGATTCTCTCCTTCTCCTTCTGCGACGAGGAAGCTTAGATTCCAAAATCGCCTCCGCTAGGGTTCTGCAATTCATCGCCATGGACGCGGAGTCGAAGCTTTTCCTCGGCCAGAAAGAAGGCGTCGTGGCTGAATTACTGAAATTGGCGGCGCCGGAGAAAGATCAGGTGCTCATCGAGGCTGCGCTGGGCAGCCTGGTGGCCATTTCGCCTCCCAAGCGGAACAAATTGAAGCTGGTGAATCTGGGAGCGGTGAAGGCCATGTCCAGGTTGTTGACGGGGGCGAATTTGGGCGCGACGGCCGTGGAGAAGGTGCTGAAGCTGGTGGAAACGGCGTCTTCGACGAGGGAGGGGAGGAAGGAGATATGCGAGGACGCGGCGTGCGTGGCGGCCGTGCTGAGCAAGGCTCTGAAGGTGTCGAGCGTGGCGACGGAGCACGCGGTGACGACGCTGTGGAGTGTGTGTTATCTGTTTCGCGATCGGAAGGCGCAGGAAGCGGTCACTCAGGCGAATGGGTTGACCAAGATTCTGTTGCTGATGCAGAGTAATTGTACGGCGCAGGTGCGCCAAATGTGCACCGATTTGCTCAAGATTTTTCAGGTTAATTCCAAGTCATGCCTTTCATGCTACGACACCGAGACCACTCATATCATGCCCTTTTGA 1221 0.5405 MVRARDDLCITVPSFFKCPISMDVMKSPVSLCTGITYDRSSIQRWLDAGNNTCPATMQLLQTKDLVPNRTLQSLIQIWSHSVRPPTPPPSSDQLLQTIAHLESHSLRFASLSKLLHFAAASHQNKLLLAKTQNFVHRLLRFLHTGVTTTTTLQFLQQLLLLLCLLLDTIEDSQAFKNSMLKENKHCLDSLLLLLRRGSLDSKIASARVLQFIAMDAESKLFLGQKEGVVAELLKLAAPEKDQVLIEAALGSLVAISPPKRNKLKLVNLGAVKAMSRLLTGANLGATAVEKVLKLVETASSTREGRKEICEDAACVAAVLSKALKVSSVATEHAVTTLWSVCYLFRDRKAQEAVTQANGLTKILLLMQSNCTAQVRQMCTDLLKIFQVNSKSCLSCYDTETTHIMPF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03705 406 SMART Ubox_2 15 78 IPR003613 GO:0004842|GO:0016567
Pste2g03705 406 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 83 IPR013083 -
Pste2g03705 406 FunFam RING-type E3 ubiquitin transferase 4 84 - -
Pste2g03705 406 SUPERFAMILY RING/U-box 6 80 - -
Pste2g03705 406 SUPERFAMILY ARM repeat 94 388 IPR016024 -
Pste2g03705 406 CDD RING-Ubox_PUB 13 65 IPR045210 -
Pste2g03705 406 PANTHER WDSAM1 PROTEIN 11 394 IPR045185 GO:0061630
Pste2g03705 406 Pfam U-box domain 12 80 IPR003613 GO:0004842|GO:0016567
Pste2g03705 406 ProSiteProfiles U-box domain profile. 11 85 IPR003613 GO:0004842|GO:0016567
Pste2g03705 406 Gene3D - 151 394 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03705 Pste-Chr2 40660752 40661972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03705 5 406 U-box Gene Family AT5G64660 49.165 3.57e-135 392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03705 2 40660752 40661972 Pste2g03705 2 40660752 40661972 ECH