Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03702 ATGAGTTTGATGCAAACAGAAAGTTCAGAGGAGGGTGCAGGCCTTCTGGAGCCTCCTGATCCCAATGTTATTGAAATTGATCCTACCAATCGCTACGTTAAGTATAAAGACATAATCGGCCAAGGAGCTTTCAAGACTGTTTACAAGGCATTTGATGAAATCAATGGACTCGAAGTTGCATGGAGCCAAGTTCAGATTGATGAGGTATTACATACCCCCGGCGGTTTAGAGAGGCTCTACTCTGAAGTTCATCTCTTGAAGTCACTCAAGCATGATAGCATAGTAATGTTCTATAATTCCTGGATTGATGACAAGCATAGGACTCTTAACTTGATTACCGAGTTGTTCACCTCTGGGAGCCTCAGACAGTACAGTAAGAAACACAGGAAGGTTGACATGAAGGCTATTAAAGGATGGGCAAGGCAGATTTTAATGGGTTTAAACTATCTCCACAGTCACAACCCACCTATTATACATAGGGACCTGAAGTGTGATAATATATTTATTAATGGTCACCGAGGAGAAGTTAAAATTGGAGATCTAGGGTTGGCGACTCTGTTGAAGCAGACTAATGCCAAGAGTGTAATTGGTATTTATATTTACACATATGTAATCCTACTAGGAACCCCCGAGTTTATGGCACCTGAACTGTATGATGAACAGTATAATGAATTAGCCGACATATATTCTTTCGGGATGTGCATGCTTGAGTTGGTTACGGCTGAATATCCTTACAGTGAATGTAGAAACTCTGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCTGTTGCCCTTTCCAAACTCAAAGATTCAGAAGTAAAAACATTTATTGAGAAATGTCTTGTCCCGGCATCTCAAAGATTGTCAGCAAAGGAGCTTCTGAAGGACCAGTTTCTGCAAGTGAATGGTTCAATGAAGAACCGTCGGCTCCCATTACCAGATATTGTTCTTCCAAAATATGGAGCCTTTGAAAATCGTTGTCTGATGTCAGAAGGCCCGGCTAGTACACGTATTAGATCCATTTCAATGGATCTTGGTGATGCCACTGAGCTGCCATTGACAACTTTACTTTATAATTCTGTTAATTCTATTGATGATGTATTGCCTTCCCCGTGTGTTGAGATACGAAGGTTGAAGGAAGGTGACATCTTTTTTCTAAAAGGTGAACAAAATGATGAGAAGTCTGTATCTTTAGTTCTCCGAATAGCTGATCAGAGTGGGCGGGCAAGAAATATCCATTTTATATTCTACATCAACAGTGATACTGCCATATCAGTTTCAAGTGAAATGGTTGATCAACTAGAACTTGCTGAGCAAAATGTGAAATTCATAGCGGAATTAATTGACCTGTTGTTGATAACGTTGCTTCCAGATTGGAAACCTTGTGTAGCAATCGACCATTTAGTTTCTACTAATGGTAAAGTAACTCATATGAGCCAACAGAAAGACTTAGAGTTTGCAAAATACAAACAAATGTCAAAACATTCCAGCCGAAGTATGTATGAAGATGTGGGTCTCTCAACCTCACCTGCAAGATCAGCAGAAAAGGAAAACAATGATGATATGATTTTGGACAAGGTACTGTCTCACGCAAGCGTTGGTCTTCAAAGAGCAATAAAGACAGATGATACGTATTCAGAGATGTCATACACTTCCACATCTGAGTTCAATGATAAGCATTTTTCTACAGTTTCATTCATGTCTGCTAAATCAGGATTTACAGACTTTGACTTGCCTAAAGTTAATAGTCAAAGCTCACTTGCATCTGAATTCGGGGCATCATCTGATTATAGGACTTATCCGTGCATGGAAAGCAATGGTACGATGAAATTCTCTAATTATGGCAACAGTTCTTCCTCCTTGTATGGACATGAGGATGACTTGAGAATAGAGATAGAGATGATTGACCAGCAATATGAAGAGGCAATTAAAGATGTAACAAGAAAAAAATACAAGGCCATCATGGAGGCTACAAAGAGGCACGCACAAAAAACCGCAAGCATAAAATAA 2016 0.3948 MSLMQTESSEEGAGLLEPPDPNVIEIDPTNRYVKYKDIIGQGAFKTVYKAFDEINGLEVAWSQVQIDEVLHTPGGLERLYSEVHLLKSLKHDSIVMFYNSWIDDKHRTLNLITELFTSGSLRQYSKKHRKVDMKAIKGWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGHRGEVKIGDLGLATLLKQTNAKSVIGIYIYTYVILLGTPEFMAPELYDEQYNELADIYSFGMCMLELVTAEYPYSECRNSAQIYKKVSSGIKPVALSKLKDSEVKTFIEKCLVPASQRLSAKELLKDQFLQVNGSMKNRRLPLPDIVLPKYGAFENRCLMSEGPASTRIRSISMDLGDATELPLTTLLYNSVNSIDDVLPSPCVEIRRLKEGDIFFLKGEQNDEKSVSLVLRIADQSGRARNIHFIFYINSDTAISVSSEMVDQLELAEQNVKFIAELIDLLLITLLPDWKPCVAIDHLVSTNGKVTHMSQQKDLEFAKYKQMSKHSSRSMYEDVGLSTSPARSAEKENNDDMILDKVLSHASVGLQRAIKTDDTYSEMSYTSTSEFNDKHFSTVSFMSAKSGFTDFDLPKVNSQSSLASEFGASSDYRTYPCMESNGTMKFSNYGNSSSSLYGHEDDLRIEIEMIDQQYEEAIKDVTRKKYKAIMEATKRHAQKTASIK 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03702 671 SUPERFAMILY Protein kinase-like (PK-like) 35 302 IPR011009 -
Pste2g03702 671 Pfam Protein kinase domain 36 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03702 671 CDD STKc_WNK 31 301 - -
Pste2g03702 671 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Pste2g03702 671 FunFam Serine/threonine-protein kinase WNK8 396 493 - -
Pste2g03702 671 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 654 - -
Pste2g03702 671 MobiDBLite consensus disorder prediction 1 21 - -
Pste2g03702 671 Coils Coil 627 647 - -
Pste2g03702 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Pste2g03702 671 Gene3D Transferase(Phosphotransferase) domain 1 116 308 - -
Pste2g03702 671 ProSiteProfiles Protein kinase domain profile. 33 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03702 671 FunFam probable serine/threonine-protein kinase WNK9 116 306 - -
Pste2g03702 671 Gene3D - 396 495 - -
Pste2g03702 671 SMART serkin_6 33 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03702 671 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03702 Pste-Chr2 40544681 40547497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03702 133 471 MAP Kinase Kinase Kinase AT1G49160 66.667 1.21e-163 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pste2g03702 Pkinase 7.5e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03702 2 40544681 40547497 Pste2g03702 2 40544681 40547497 ECH
Pste3g01626 3 10251810 10255146 Pste2g03702 2 40544681 40547497 PCT