Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03692 AATGGAAAGAAACGTTTATGGACAACTTGGTAACAAGATTCGTGTTAGATAATAATGAGGCATTAAATGAGATTGAAAAGGAGGTAGGTGGCGATCGAGCTCATCTTTGTAAGCCTTCATCTCCAGGGGCATGTGATGGAGCAATTGGTGGATCCATCTTTTCTTGTTCCAAGCTAAATGATACCACCTGTGGCGTGGCGAAGACAAGTGGGTTTCACCGGAGTGAGGTGCTCATTTCTGGCCTACTACCCACATCAACGACAGCACGGAGAGAGAGAGAGGGTGCAAAGCCATCTTCTTCTTCTCCCATCTCGCCTTTCCTCATCCTCCTTCTCGTTTCAAAGATGGCTGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAGGCGGGATTTGCTGGTGATGATGCTCCTAGGGCTGTGTTTCCCAGTATTGTTGGCCGACCTCGTCATACTGGTGTGATGGTTGGGATGGGTCAAAAGGATGCCTATGTAGGTGATGAGGCCCAGTCAAAAAGAGGTATCCTTACTCTAAAGTACCCAATCGAGCATGGTATAGTCAGTAACTGGGATGACATGGAAAAGATCTGGCATCACACATTTTACAATGAATTGCGTGTTGCTCCTGAGGAGCACCCAGTGCTTCTAACCGAGGCTCCACTCAACCCTAAGGCCAACAGAGAAAAAATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTTCTCTCCCTATATGCAAGTGGTCGCACAACTGGTATTGTTTTGGACTCTGGTGATGGTGTGAGTCACACCGTTCCAATCTATGAGGGCTATGCACTCCCTCACGCCATCCTTCGATTGGATCTTGCCGGCCGTGATCTAACCGACTCTTTGATGAAGATCCTCACTGAGAGAGGGTACATGTTCACTACCTCAGCTGAGCGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTATGTTGCCTTGGATTATGAGCAAGAACTTGAGACTGCAAAGAGCAGTTCTTCAGTTGAGAAAAACTACGAGCTTCCTGATGGACAAGTTATCACAATTGGAGCTGAGAGATTCCGTTGCCCTGAAGTTCTCTTCCAGCCTTCTATGATTGGAATGGAAGCTGCAGGAATTCATGAGACCACCTACAACTCTATAATGAAATGTGACGTGGATATTAGAAAGGATCTGTATGGCAACATTGTTCTTAGTGGTGGCTCAACTATGTTCCCTGGTATTGCTGACCGTATGAGCAAGGAGATCACTGCACTTGCTCCTAGCAGCATGAAGATTAAGGTTGTGGCCCCACCAGAGAGGAAGTATAGTGTCTGGATTGGAGGATCAATCCTTGCATCTCTCAGCACCTTCCAGCAGATGTGGATATCGAAGAGTGAATATGACGAGTCTGGTCCATCCATTGTCCACAGGAAGTGCTTCTAAGTCCAGAAGAAATGCTTTAATGGTGAGTTATATTTTTCGCTGTGGTTGCTTTTTTGGTGTCTGTGTCATGTCATGCGAACTATGTTGCGATGGATAAGAGGTGGGATAAGGATCATTGGAGGGTATATTCCATGTCTGATGTATCATATTGTGTGGCATCCCTCTGGGTATGGCGGGCACATAGTTGTTGAGAAGCATTTTTCGCCTTGGAATTCATCGATACCATCGTAAGTAGACTGTCTGTAAGCAAGGAGTGATTGTGATGCTTATTTTCTTTTTACCCTTTTTCTGAGTTCACAC 1778 0.4601 MDNLVTRFVLDNNEALNEIEKEVGGDRAHLCKPSSPGACDGAIGGSIFSCSKLNDTTCGVAKTSGFHRSEVLISGLLPTSTTARREREGAKPSSSSPISPFLILLLVSKMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03692 486 Gene3D Actin; Chain A, domain 4 291 382 - -
Pste2g03692 486 Gene3D - 119 480 - -
Pste2g03692 486 FunFam Actin, alpha skeletal muscle 112 276 - -
Pste2g03692 486 SUPERFAMILY Actin-like ATPase domain 115 264 IPR043129 -
Pste2g03692 486 SUPERFAMILY Actin-like ATPase domain 258 486 IPR043129 -
Pste2g03692 486 FunFam Putative actin-related protein 5 450 478 - -
Pste2g03692 486 PRINTS Actin signature 226 239 IPR004000 -
Pste2g03692 486 PRINTS Actin signature 251 270 IPR004000 -
Pste2g03692 486 PRINTS Actin signature 347 363 IPR004000 -
Pste2g03692 486 PRINTS Actin signature 137 146 IPR004000 -
Pste2g03692 486 PRINTS Actin signature 160 171 IPR004000 -
Pste2g03692 486 PRINTS Actin signature 172 194 IPR004000 -
Pste2g03692 486 SMART actin_3 116 486 IPR004000 -
Pste2g03692 486 CDD NBD_sugar-kinase_HSP70_actin 119 292 - -
Pste2g03692 486 ProSitePatterns Actins signature 1. 164 174 IPR004001 -
Pste2g03692 486 Pfam Actin 114 486 IPR004000 -
Pste2g03692 486 ProSitePatterns Actins and actin-related proteins signature. 215 227 IPR020902 -
Pste2g03692 486 FunFam Major actin 369 449 - -
Pste2g03692 486 ProSitePatterns Actins signature 2. 467 475 IPR004001 -
Pste2g03692 486 Gene3D - 249 449 - -
Pste2g03692 486 PANTHER ACTIN 118 479 IPR004000 -
Pste2g03692 486 FunFam Actin, muscle 291 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03692 Pste-Chr2 40407826 40417994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03692 110 486 Cytoskeleton Gene Families AT5G09810 98.674 0.0 777