Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03689 CACACTCTCACCCATTTCACTTCTTTTTTTAATTTTCCACTTTTAAATTTAAATAATATAACTCCTCCCCTCCATTATTATTATTATTCACCTTTCAAAATGCTCTCTCCCTTGTAAAATAATAACAATAACAATAATGGGTATGGTAGAACTACACTTAGTAGCCCTTGAAATTTGAAACAGCACAAACAATACCAACTCCCCTCCAACTAAAAACACACTACTCCAGTTATCAAAATTACCCTTTTCCATTTTTTCCCCCAAATTTCACCAGGGCTGATTTTTCTCTTTTGCCCCCCACCCTTCTGAGTTTCTCTTGGCTGTAACTTGGGTGAAACCGATGCTGCAAATCTCAACTTTACCGGAAACCCAGTTCGAGAACCTGAATGGCGGCGCCGTGCCGGTCTCCGACGGGTTAAAGGCGGACCACGGTGAAGAGGGTGACCGGAATTCCTCCGCGAACCGGTGGCCTCGTGCGGAGACAATGGCTTTGCTGAATATAAGATCAGACATGGACGTTGTTTTCAGAGATACAAACCCCAAAGCCCCTCTCTGGGAACAAGTCTCAAGGAAATTAGCGGAGCTAGGATATGATAGAAGTGCCAAGAAGTGCAAGGAGAAGTTCGAGAACATTTACAAGTACCATAGGAGGACTAAGGAAGGTCGTTATGGCAAATCCAACGGTGCCAAAACCTATCGATTTTTCGAACAATTGGAAGCTTTAGACGGAAACCACTCTCTCCCTCCAGAAACAACAACAACTCACGTGACCAACAACAACAACAACAACAACAACAACAACAACGTTGATGTTATCCGAGACGCGGTTCCGTTTTCCGTTAGTGCGCACGAACAGGAACAGGAGCAGGAGCATGAACATTCTAGTTCGACGACTTCGTGTTCGGGGAAAGGGTTCAAGAAGCGGAAGCTGACGCAGTTTTTGGAGGGGTTGATGAAGGAAGTGATAGAGAAGCAAGAAACACTGCAGAGGAAGTTCATGGAGGTTTTGGATAAGTGCGAGAAGGATCGAATGGTGCGGGAGGAGGCGTGGAAGAGGGATGAACTCGCCAGGATTAAGAGGGAACGCGAGCTTCTCGCTCAGGAACGGTCTATTGCCGCGGCCAAAGATGAAGCTGTGCTTGCGTTTCTCAAAAAGTTTGCTGAAGCACAAGGCACGGTGCAGTTGTTCCAGAAAATTCAGGTTCAAAACGACAAAGACAAAGACAAGGGCATGCAACAAAATGAGGATGCTAATGCTAATGCCAATGCTAATGGGGATGATACGGATAAGCAAGAGTGTGGAAACAGTGTTAGTGTTGGGAATTTTGTACACATGAGTTCTTCGCGGTGGCCTAAGGATGAAGTGGAGGCTTTGATACGGTTGAGGACACAGCTTGATGTGCAGTCTCAAGGGAATAATAATAATAATAATAATAATAACAATAATGGGTCAAAGGGGCCTCTTTGGGAGGAGATATCTTCGGCCATGAAGAGCCTTGGTTATGATCGAAGTGCTAAGAGGTGTAAAGAGAAATGGGAGAACATAAACAAATACTTCAAGAGGATGAAGGAGAAGAACAAGAGGAAGCCTCAGGATTCAAAGACGTGTCCTTACTATCACCACCTTGAAGCTTTGTACAGTAAGAAGCCTAAGAAGGTCGATGAGAATAGTCCTGGAAACGAGTTGAAGCCAGAGGAGCTATTGATGCATATCATGGAGAGTCAAAGTCAAGAAGAAGAGAGACATCAACAGATTCAGACTCAGTCGTCATCTGAAGATGCTGAGAGAGAGAACACGGATCAAATTCTGGGAGATAATGAAAATCAAAGTGAGTATCAAATGGTCGATAATAATAGTCCTTCCGTAGCAATAATGAGTTAG 1882 0.4416 MLQISTLPETQFENLNGGAVPVSDGLKADHGEEGDRNSSANRWPRAETMALLNIRSDMDVVFRDTNPKAPLWEQVSRKLAELGYDRSAKKCKEKFENIYKYHRRTKEGRYGKSNGAKTYRFFEQLEALDGNHSLPPETTTTHVTNNNNNNNNNNNVDVIRDAVPFSVSAHEQEQEQEHEHSSSTTSCSGKGFKKRKLTQFLEGLMKEVIEKQETLQRKFMEVLDKCEKDRMVREEAWKRDELARIKRERELLAQERSIAAAKDEAVLAFLKKFAEAQGTVQLFQKIQVQNDKDKDKGMQQNEDANANANANGDDTDKQECGNSVSVGNFVHMSSSRWPKDEVEALIRLRTQLDVQSQGNNNNNNNNNNNGSKGPLWEEISSAMKSLGYDRSAKRCKEKWENINKYFKRMKEKNKRKPQDSKTCPYYHHLEALYSKKPKKVDENSPGNELKPEELLMHIMESQSQEEERHQQIQTQSSSEDAERENTDQILGDNENQSEYQMVDNNSPSVAIMS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03689 513 SMART sant 333 405 IPR001005 -
Pste2g03689 513 SMART sant 39 101 IPR001005 -
Pste2g03689 513 Pfam Myb/SANT-like DNA-binding domain 335 432 IPR044822 -
Pste2g03689 513 Pfam Myb/SANT-like DNA-binding domain 41 128 IPR044822 -
Pste2g03689 513 ProSiteProfiles Myb-like domain profile. 335 403 IPR001005 -
Pste2g03689 513 FunFam Trihelix transcription factor GT-2 43 104 - -
Pste2g03689 513 MobiDBLite consensus disorder prediction 292 322 - -
Pste2g03689 513 MobiDBLite consensus disorder prediction 137 156 - -
Pste2g03689 513 CDD GT1 41 106 - -
Pste2g03689 513 MobiDBLite consensus disorder prediction 353 375 - -
Pste2g03689 513 MobiDBLite consensus disorder prediction 490 513 - -
Pste2g03689 513 ProSiteProfiles Myb-like domain profile. 35 99 IPR001005 -
Pste2g03689 513 MobiDBLite consensus disorder prediction 26 40 - -
Pste2g03689 513 MobiDBLite consensus disorder prediction 14 42 - -
Pste2g03689 513 Gene3D - 337 408 - -
Pste2g03689 513 Gene3D - 43 104 - -
Pste2g03689 513 PANTHER FI21293P1 29 486 - -
Pste2g03689 513 MobiDBLite consensus disorder prediction 301 322 - -
Pste2g03689 513 CDD GT1 335 410 - -
Pste2g03689 513 FunFam Trihelix transcription factor GT-2 337 408 - -
Pste2g03689 513 MobiDBLite consensus disorder prediction 168 190 - -
Pste2g03689 513 MobiDBLite consensus disorder prediction 459 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03689 Pste-Chr2 40353351 40355410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03689 336 453 Trihelix Transcription Factor Family AT1G76880 36.441 9.09e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste2g03689 Myb_DNA-bind_4 4.2e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03689 2 40353351 40355410 Pste2g03689 2 40353351 40355410 ECH