Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03671 TATTTTTGCATGCAGAAGCAGAAGCAGAAGCAAAGGGTGTGTAATGAAACAAGCTTGGATTGTGTTTCCACGTGTTTATCAAAGGTGGCAAATCCAAATCCTGAGGAGAAAGGAAACGACGTTGACAATAAGGAATTATTATGCCATGAAGGGATGAAGAACCCTGCATTGTCAAGGCTATTTCCCGGCATGAATAGGGAGCGAGAGATGTCTGCTATTGTCTCTGCTTTGACCCACGTTGTCTCCGGAGACATTCCAACCCCTCATTCTTCACTTCATCATGGTGTTACATCAACCAACACCGCTCCTTTGCCTTCTTCATCTCTCAAGCGAAATAGAGAACATGATACTCATACATACACCATGCCAACAAGTACAGAATGTTCAAATAGAGAGACAAGTGAAAGAAGGGAAATGGTAAATGCAGTCTATGAATACAGAAAAGTAGAGAATGCAACAAGAGATGATGGAAGGAGGAAATACAGAGGGGTGAGGCAAAGGCCGTGGGGGAAATGGGCGGCGGAGATAAGAGACCCGTTCAAGGCGGCGAGGGTGTGGTTAGGAACATTCGACACCGCAGAGGCCGCCGCCAGAGCCTACGATGAAGCCGCGCTTCGGTTCAGAGGGAACAAGGCCAAACTCAACTTTCCTGAGAATGTCACTCTTCGCCAACCTCACTTCACCATTACAAACTCCACCCATCCTGTTCTTCACACACCACCTTCTCAATCTCAATCTCAATCTCAGCCTTCAACCTCAACCAATTTCTACGACTATTTTCAACTCTTGGGCTTCCCCACTGACACTTATGACAATACCGTGTTTCTTACCACCTCCTCTTCTTCTTCGCTGCCACCACCAACCTCCTTCTCTTCTTCCACTTCTTTAACTTCCACTTCACTTTCTTCTTCCTCCTCCTTCTATTCAACCCAGCCACCGCCCTGGTCAGCCTCTGCTCATACCTCTTCTTCCTCCGGATGATCCTTTTTCTTTATCATTATCCCACTCTGTATTTTCTTCTTATATCATATACTTCATTGTTCCTTCTCATCAAAATAATATATACTCACATACTTATTCATTTCTTTTATTTAACCACCTCTCTTATCTGTAATTGCATTCCCATTCGGTTAGTGATTCTTGATTTTTGATTTTACATGTTCATCAGCAAAGGTAGTTCGCAATCTTTATGCTTTAAATCCTCCCCTCCCATTCCGCTGTTCCTAAGAGTTATGCATCGTTTATGAATCGTGGATGAGGAGATAGTTTTTTATATATATACTTCCGGGTCTCACCTCTCTTAATCTGTTGAGCTGCTTTTATGGGCAAATTTGTAACATCTCATGTCAACATCAAAGCAGACCAATGATCATCATATGCTGCTGCAAATTTAAGATAAGATTGGAACATTGATTCATTCTAGAATACTGGCTTATCCCACGTGCAAGGGCTGACAAACCTTCCAGCCATTAAGCCTGGACTTGGAGACTACTTCTCCTGTGTGCCTGAAAATTTCATATATCCAAACATTTTTTAAGGATCAATTCCGAAGAACCTCAAATTAAAAATAATATATCACAAGAACTTACGATAACACTACATCTTGAGAATGGTGACTCGACGCTGCTTCAGAACTAATGTCCCAACACCTTCATAATCCATAAACTATTACCGTG 1676 0.4236 MQKQKQKQRVCNETSLDCVSTCLSKVANPNPEEKGNDVDNKELLCHEGMKNPALSRLFPGMNREREMSAIVSALTHVVSGDIPTPHSSLHHGVTSTNTAPLPSSSLKRNREHDTHTYTMPTSTECSNRETSERREMVNAVYEYRKVENATRDDGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVTLRQPHFTITNSTHPVLHTPPSQSQSQSQPSTSTNFYDYFQLLGFPTDTYDNTVFLTTSSSSSLPPPTSFSSSTSLTSTSLSSSSSFYSTQPPPWSASAHTSSSSG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03671 323 MobiDBLite consensus disorder prediction 85 111 - -
Pste2g03671 323 CDD AP2 157 216 IPR001471 GO:0003700|GO:0006355
Pste2g03671 323 PRINTS Ethylene responsive element binding protein signature 158 169 IPR001471 GO:0003700|GO:0006355
Pste2g03671 323 PRINTS Ethylene responsive element binding protein signature 180 196 IPR001471 GO:0003700|GO:0006355
Pste2g03671 323 PANTHER DNA-BINDING DOMAIN 120 291 IPR044808 GO:0003700|GO:0009873
Pste2g03671 323 FunFam Ethylene-responsive transcription factor 2 156 215 - -
Pste2g03671 323 SMART rav1_2 157 220 IPR001471 GO:0003700|GO:0006355
Pste2g03671 323 MobiDBLite consensus disorder prediction 228 249 - -
Pste2g03671 323 MobiDBLite consensus disorder prediction 88 105 - -
Pste2g03671 323 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Pste2g03671 323 Pfam AP2 domain 157 206 IPR001471 GO:0003700|GO:0006355
Pste2g03671 323 MobiDBLite consensus disorder prediction 275 323 - -
Pste2g03671 323 ProSiteProfiles AP2/ERF domain profile. 157 214 IPR001471 GO:0003700|GO:0006355
Pste2g03671 323 Gene3D AP2/ERF domain 156 216 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03671 Pste-Chr2 39947176 39948933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03671 57 242 AP2-EREBP Transcription Factor Family AT5G64750 48.309 1.16e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste2g03671 AP2 3.8e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03671 2 39947176 39948933 Pste2g03671 2 39947176 39948933 ECH
Pste3g01684 3 10692509 10693981 Pste2g03671 2 39947176 39948933 ECH