Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03667 TTCTCTCCTCCTCCTCCTCACAAAGAGGAGAGGCCGAAACGCCATATGAAGAGAGTTGTGACCCACAATGGTTCAAGGGCTACACGTTCCTCTAAGCACGTGGGAGTGACTCAGAGACACAGAGGGAGTGTCAATGCCAAGAGCAAGACGGATGGAGATGTTAGAAGAGGAGGAGAAAAACAAAATGTCGTTGCTAAAAAGGACAAGAGTCAAGAATCGGATGCAAAGGACCAAAACATGGCTAAATACGAATTTGTCGCCGGCTGGCCAAACTGGTTACTCCACAATATCCCCACTCATGTTTTAGCTAATATTATTCCTAAGACCGCTGATTCCTATGAAAAAATTGCAAAGATAGGACGTGGAACATATAGCAATGTGTACAAAGCAAGAGAAAAGGGTACGGGAGAGATTGTTGCTATGAAGAAGGTAAGGTTTGACACATCGAATTCTGAAAGCATCAAGTTTATGGCAAGAGAGATCATGATACTGCAAAGACTAGATCATCCCAATGTCATCAAACTTAAAGGACTAGCAACATCAAGGATGCAGTATAGTCTTTATCTTGTTTTTGACTTCATGCAGTCAGATTTGACCCGGATTATCTCCAGACCTGAGGAGACTCTCACTGAAGCACAGATCAAGTGCTACATGCAGCAGCTGCTTTGTGGCCTTCAGCACTGTCACGAGAGGGGAGTAATGCACCGGGATATTAAGGCTTCTAACTTGTTAATAGACAGAAAAGGGGTGTTGAAAATTGCAGATTTTGGGCTTGCAACTTCCATTGAAGCTGAAAAACCTCTGACAAATAGAGTGGTGACACTTTGGTATAGAGCTCCAGAACTTCTTTTGGGTTCAACTGATTATGGATATAGCATTGATCTCTGGAGTGCAGGGTGCCTGTTGGCTGAGATGTTCGTTGGTAGACCCATTATGCCTGGCAGGACAGAGGTTGAACAGATTCACATGATCTTCAAACTTTGTGGCTCTCCTTCAGAGGATTACTTTAGAAAACTGAAGCTAACAACAAGCTACCGGCCTCCACAACATTACAAACCTAGTTACCGAGAAAACTTCCAAAAGTTTCCTTCCTCTTCTCAAGCTCTCTTGGCTACACTTCTTCATCTCATCCCTGCACATCGTGGCACTGCAGCCTCTGCTCTCCAAAGTGAATTTTTCAAATGCAGTCCATTAGCATGTGACCCTTCAGCCTTGCCAGTAATCCCCAAAGACGAGGATGAACGCTTACAAACTAAGAGAGGCAAA 1266 0.4408 FSPPPPHKEERPKRHMKRVVTHNGSRATRSSKHVGVTQRHRGSVNAKSKTDGDVRRGGEKQNVVAKKDKSQESDAKDQNMAKYEFVAGWPNWLLHNIPTHVLANIIPKTADSYEKIAKIGRGTYSNVYKAREKGTGEIVAMKKVRFDTSNSESIKFMAREIMILQRLDHPNVIKLKGLATSRMQYSLYLVFDFMQSDLTRIISRPEETLTEAQIKCYMQQLLCGLQHCHERGVMHRDIKASNLLIDRKGVLKIADFGLATSIEAEKPLTNRVVTLWYRAPELLLGSTDYGYSIDLWSAGCLLAEMFVGRPIMPGRTEVEQIHMIFKLCGSPSEDYFRKLKLTTSYRPPQHYKPSYRENFQKFPSSSQALLATLLHLIPAHRGTAASALQSEFFKCSPLACDPSALPVIPKDEDERLQTKRGK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03667 422 MobiDBLite consensus disorder prediction 44 77 - -
Pste2g03667 422 SMART serkin_6 113 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03667 422 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Pste2g03667 422 Gene3D Phosphorylase Kinase; domain 1 102 195 - -
Pste2g03667 422 Pfam Protein kinase domain 113 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03667 422 MobiDBLite consensus disorder prediction 23 43 - -
Pste2g03667 422 FunFam Putative serine/threonine-protein kinase 196 422 - -
Pste2g03667 422 ProSiteProfiles Protein kinase domain profile. 113 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03667 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Pste2g03667 422 Gene3D Transferase(Phosphotransferase) domain 1 196 421 - -
Pste2g03667 422 MobiDBLite consensus disorder prediction 1 77 - -
Pste2g03667 422 SUPERFAMILY Protein kinase-like (PK-like) 106 396 IPR011009 -
Pste2g03667 422 CDD STKc_CDK9_like 113 393 - -
Pste2g03667 422 PANTHER CELL DIVISION PROTEIN KINASE 111 398 - -
Pste2g03667 422 FunFam probable serine/threonine-protein kinase At1g54610 100 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03667 Pste-Chr2 39823378 39828465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03667 108 420 Core Cell Cycle Gene Families AT5G10270 45.783 3.46e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste2g03667 Pkinase 1.2e-71 CL0016