Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03664 ATGAAGGCCCTGTACAGAACATCTCTGCTCGTCCTACTCCTCCTCTTATCCCTCATCTTTGCACGTGCATCGTCGTCTTCTTCTTCTTCTTATGTTCCCAACATTATTCAGCAACTCATCAAGTTCAAAGCCTCTCTCCCCAACCCGTCCGTGCTCCCGAACTGGATCCCCAACCAAAGCCCATGTCTATTCACAGGTATCACCTGCAACGAAAGCCACATAACTTCCATAGACCTGAGCTGGATCCCTCTGGGAACTAATTTGTCCGTCATGGCCACGTACCTCCTGAGCCTGGAGCACCTGGAGTCCCTGACCCTGAAATCGACGAACCTCACCGGTCCCGGCAGCATTCCTCACAGCCACTCGAGGTGCGCCTCGACATTAACCTTGTTAGATCTATCGCTAAACGGTCTGTCCGGTTCCCTGAGCGACATGTCCTTTCTGGCCTCATGCCCCAACCTGCAGTCCCTGAACCTCTCCAGCAACCTCCTGGACTTGGAGGGCTCCCCGGCCCGGTGGCAGCTGAACCTAGGCGTGGCTGACCTCTCGTACAACAAGTTTTCCGGGCCGGGGCTCCTCCCCTGGGTCCTGAACCGGGACATGAAACACCTGGCGTTGAAAGGCAACAAAATAACAGGGGAAGCTGACTTCTCCGGTTCCCCTTCTCTCCAGTACTTGGACCTCTCCTCCAACAACTTCTCCGTCTCCATTCCTTCCTTCGGCGACTGCTCCTCACTGGAATACTTGGACATCTCTGCCAACAACTACATGGGCGACATTGCACGCACCCTCTCTCCCTGCAACTCCCTCGTTTACCTGAACCTCTCAAGCAACCAGTTCTCCGGTCCTCTTCCCTCCCTCCCCTCCGGTTCCCTCCAGTACGTCTACCTTGCCTCCAACCACTTCCACGGCCTCATTCCCCCCTCCCTCCCCGACCTCTGCTCCACTCTCCTCCAACTCGATCTCTCCTCCAACAACCTCACCGGTCCCCTCCCTGACTCCTTCTCCTCCTGCACCTCCCTCCACTCCTTCGACATCTCCTCCAATCTCTTCTCCGGCCCCTTTCCCATCCACCTTCTCACCCAAATGACCAGCCTCAAGGTGCTTTCCCTCTCCTTCAACGACTTCCTCGGTTTTCTCCCCGACTCCCTCTCCAAGCTTTCCACTTTGGAGCTCCTTGATCTCAGTTCCAACAACTTCACCGGACCTATCCCCTCCACCCTCTGCACTACTAACTTGAAGGAACTTTACCTCCAGAATAACCTCTTCACCGGTTTCATTCCTCCCACTCTCAGCAACTGTTCCAACCTTGTTGCCTTGGACTTGAGTTTCAACTTCCTCCGCGGCACCATCCCTCCCTCCCTAGGCTCTCTCTCCAAGCTTCGAGACTTAATCATCTGGCTCAACCAGCTCCACGGCGAGATTCCTCCTGACCTCATGTACCTCAACAACCTCGAGAACTTGATCCTCGACTTCAACGACTTGACCGGCACCATTCCCTCTGGCCTCGTTAACTGCACCAAGTTGAATTGGATCTCCCTCTCCAACAACAGGCTCAGCGGCCAGATTCCCCCCTGGATTGGCAAGCTTTCTAATCTTGCCATTCTCAAGCTCAGCAATAACTCTTTCTCCGGCCCTATTCCCCCCGAGCTCGGCGATTGTACCAGCCTCATATGGTTGGATCTCAATACCAATTCCCTCACCGGCCCCGTTCCTCCCCAGCTCTTCAAGCAGTCCGGCAAGATCGCCGTCAATTTCATCAGTGGCAAGACCTATGTCTATATTAAAAACGATGGTAGTAAAGAGTGCCACGGTGCCGGCAACTTGCTCGAGTTTGCCGGGATCAGTCAGCAGCAGCTCAACAGGATTTCCACCAGGAACCCCTGCAATTTCACCAGGGTTTACGGAGGTAAGTTGCAGCCAACGTTTAACCACAATGGTTCTATGATTTTTCTGGATATCTCCCACAACATGCTGTCTGGGAGTATTCCCAAGGAAATTGGTGCCATGTACTATTTGTACATTCTTAATTTGGGCCACAATAATGTGTCCGGGAGCATTCCTCAGGAGCTTGGCAAGATGAAGAATCTCAACATCCTTGATCTCTCCAACAATAGGCTCCAGGGCCAGATTCCCCAGTCCCTCACCGGCCTTTCTCTCCTCACCGAGATCGACTTGTCCAACAACTTGCTTTCCGGGACCATTCCCGAGTCCGGTCAATTTGACACTTTCCCTGCTACACGGTTTCAGAACAACTCTGGTCTCTGTGGAGTTCCTCTCTCCCCTTGTGGCTCTGACCTTGCAACCGCTGCGGGTGCCCAACACATGAGGTCTCACAGGAGGCAGGCCTCTCTTGCAGGGAGTGTGGCCATGGGGTTACTCTTCTCCCTCTTCTGTGTCTTTGGTTTGATCATTATTGCCATTGAAACCAGGAAGAGGAGGAAGAAGAAGGCCGGTGCTCTTGAAGCCTATGTTGATGGTAATTCGCATTCCGGTGCCGCCAATGTCAACTGGAAGCACACCAGCACTCGTGAGGCCCTTAGCATAAACCTTGCAACGTTTGAGAATCCTAATCCACTCCGGAGGCTTACCTTTGCGGACCTTTTGGATGCCACCAATGGCTTTCACAACGACTGTCTCATTGGCTCTGGAGGCTTTGGGGACGTGTACAAGGCAGAGTTGAAGGATGGAACAGGAAACGTCGTTGCCATCAAGAAACTCATACATGTTAGTGGACAGGGGGACAGGGAATTCACTGCTGAAATGGAGACCATTGGGAAAATCAAGCACAGGAACCTTGTCCCCCTTCTGGGATACTGCAAGGTTGGGGAAGAGAGGCTCTTGGTATACGAGTACATGAAATATGGAAGCCTGGAGGACGTCCTGCATGATCGGAAGAGAACTGGGATCAAGCTGAACTGGGCAATTAGGAGGAAAATTGCCAATGGAGCTGCTAGGGGATTGGCTTTTCTTCACCACAGCTGTCTCCCTCACATCATTCATAGAGACATGAAGTCGAGCAATGTGTTGATTGATGCAGACCTGGAAGCTAGAGTCTCTGATTTTGGAATGGCTAGGCTTATGAGTGCTATGGATACGCATTTGAGTGTGAGCACACTGGCGGGCACGCCCGGGTATGTTCCTCCTGAGTACTATCAGAGCTTCAGATGCTCCACCAAAGGGGATGTCTACAGTTACGGTGTGGTCTTGCTCGAGTTGCTAACCGGGAAAAGGCCAACGGACTCGGCTGATTTTGGTGATAATAATCTTGTTGGATGGGTTAAACAGCATGCCAAGCTGAAAATAAGTGATATTTTTGACCCGGAGCTCATGAAGGAAGATCCCAATCTGGAGATGGAGCTTTTGCAGCACCTGAAGATTGCGGTTTCCTGTTTGGATGATCGACCTTGGAGGCGTCCAACCATGATCCAGGTCATGGCAATGTTCAAGGAGATTCAGGCGGGATCCGGGATTGATTCTCAGTCAACCATAGCCAACGAAGATGAAGGTTTCAATGCCGTGGAAATGGTAGAGATGAGCATTAAAGAAGCCCCTGAATTGAGCAAGCATTAG 3573 0.5217 MKALYRTSLLVLLLLLSLIFARASSSSSSSYVPNIIQQLIKFKASLPNPSVLPNWIPNQSPCLFTGITCNESHITSIDLSWIPLGTNLSVMATYLLSLEHLESLTLKSTNLTGPGSIPHSHSRCASTLTLLDLSLNGLSGSLSDMSFLASCPNLQSLNLSSNLLDLEGSPARWQLNLGVADLSYNKFSGPGLLPWVLNRDMKHLALKGNKITGEADFSGSPSLQYLDLSSNNFSVSIPSFGDCSSLEYLDISANNYMGDIARTLSPCNSLVYLNLSSNQFSGPLPSLPSGSLQYVYLASNHFHGLIPPSLPDLCSTLLQLDLSSNNLTGPLPDSFSSCTSLHSFDISSNLFSGPFPIHLLTQMTSLKVLSLSFNDFLGFLPDSLSKLSTLELLDLSSNNFTGPIPSTLCTTNLKELYLQNNLFTGFIPPTLSNCSNLVALDLSFNFLRGTIPPSLGSLSKLRDLIIWLNQLHGEIPPDLMYLNNLENLILDFNDLTGTIPSGLVNCTKLNWISLSNNRLSGQIPPWIGKLSNLAILKLSNNSFSGPIPPELGDCTSLIWLDLNTNSLTGPVPPQLFKQSGKIAVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISQQQLNRISTRNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKEIGAMYYLYILNLGHNNVSGSIPQELGKMKNLNILDLSNNRLQGQIPQSLTGLSLLTEIDLSNNLLSGTIPESGQFDTFPATRFQNNSGLCGVPLSPCGSDLATAAGAQHMRSHRRQASLAGSVAMGLLFSLFCVFGLIIIAIETRKRRKKKAGALEAYVDGNSHSGAANVNWKHTSTREALSINLATFENPNPLRRLTFADLLDATNGFHNDCLIGSGGFGDVYKAELKDGTGNVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKRTGIKLNWAIRRKIANGAARGLAFLHHSCLPHIIHRDMKSSNVLIDADLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDIFDPELMKEDPNLEMELLQHLKIAVSCLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTIANEDEGFNAVEMVEMSIKEAPELSKH 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03664 1190 SMART serkin_6 875 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03664 1190 Gene3D Phosphorylase Kinase; domain 1 833 952 - -
Pste2g03664 1190 SMART LRR_typ_2 387 411 IPR003591 -
Pste2g03664 1190 SMART LRR_typ_2 694 717 IPR003591 -
Pste2g03664 1190 SMART LRR_typ_2 363 386 IPR003591 -
Pste2g03664 1190 SMART LRR_typ_2 412 434 IPR003591 -
Pste2g03664 1190 SMART LRR_typ_2 718 743 IPR003591 -
Pste2g03664 1190 SMART LRR_typ_2 482 506 IPR003591 -
Pste2g03664 1190 SMART LRR_typ_2 530 554 IPR003591 -
Pste2g03664 1190 Gene3D Ribonuclease Inhibitor 39 763 IPR032675 -
Pste2g03664 1190 SUPERFAMILY L domain-like 291 497 - -
Pste2g03664 1190 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 171 408 - -
Pste2g03664 1190 CDD STKc_IRAK 881 1152 - -
Pste2g03664 1190 Pfam Leucine Rich Repeat 412 434 IPR001611 GO:0005515
Pste2g03664 1190 Pfam Leucine Rich Repeat 365 387 IPR001611 GO:0005515
Pste2g03664 1190 Pfam Protein kinase domain 876 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03664 1190 SUPERFAMILY L domain-like 56 376 - -
Pste2g03664 1190 SUPERFAMILY Protein kinase-like (PK-like) 850 1148 IPR011009 -
Pste2g03664 1190 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Pste2g03664 1190 PRINTS Leucine-rich repeat signature 317 330 - -
Pste2g03664 1190 PRINTS Leucine-rich repeat signature 694 707 - -
Pste2g03664 1190 FunFam LRR receptor-like serine/threonine-protein kinase 505 579 - -
Pste2g03664 1190 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Pste2g03664 1190 Pfam Leucine rich repeat 484 542 IPR001611 GO:0005515
Pste2g03664 1190 Pfam Leucine rich repeat 673 731 IPR001611 GO:0005515
Pste2g03664 1190 ProSitePatterns Protein kinases ATP-binding region signature. 881 906 IPR017441 GO:0005524
Pste2g03664 1190 Gene3D Transferase(Phosphotransferase) domain 1 953 1154 - -
Pste2g03664 1190 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 409 499 - -
Pste2g03664 1190 Pfam Brassinosteroid receptor island domain 580 644 IPR045381 -
Pste2g03664 1190 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 641 763 - -
Pste2g03664 1190 Pfam Leucine Rich repeat 150 168 IPR001611 GO:0005515
Pste2g03664 1190 Pfam Leucine Rich repeats (2 copies) 221 260 IPR025875 -
Pste2g03664 1190 ProSiteProfiles Leucine-rich repeat profile. 222 244 IPR001611 GO:0005515
Pste2g03664 1190 FunFam Brassinosteroid LRR receptor kinase 953 1154 - -
Pste2g03664 1190 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 362 1150 - -
Pste2g03664 1190 SUPERFAMILY L domain-like 433 763 - -
Pste2g03664 1190 FunFam serine/threonine-protein kinase BRI1-like 2 834 952 - -
Pste2g03664 1190 FunFam Serine/threonine-protein kinase BRI1-like 1 587 644 - -
Pste2g03664 1190 Pfam Leucine rich repeat N-terminal domain 37 70 IPR013210 -
Pste2g03664 1190 ProSiteProfiles Protein kinase domain profile. 875 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03664 1190 Gene3D - 585 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03664 Pste-Chr2 39772205 39775777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03664 36 1186 Receptor kinase-like Gene Family AT4G39400 68.151 0.0 1497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pste2g03664 Pkinase 9.5e-46 CL0016