Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03661 ATGGATTACTATTTTGGAAACCCTAATAATCCCAACCCTTATTACGGTCACTCTTCCGCACTGAACATGGACTCTCCCTCCTCCGATTTCATCTTATCTGATTATCTCGTGTTGGAAGATGCTGTTGCTCATCAAGAGTCTTGGTCTCAAAGCACAGAAACTGAATCATTGGAGAAAGCAACCTCCAGCGATGTCAGTCATGGATTCGCTGATGCAACCTCCACCACCAACATGCATATGCAATGCGAAAATAAGCGAAAGAAGACACAGGTGAGTCAGAGGATCACGTTTAGAACTAGATCGCCGTTTGAGATTATGGATGATGGATATAAATGGAGGAAATACGGAAAGAAGACAGTCAAGAACAGTCCCAACCCAAGGAACTACTACAAGTGTTTAGGTGAAGAATGCAATGTGAAGAAAAGGGTGGAAAGGGATAGGGATGACTCGAGCTATGTGTTAACAACGTACGAAGGTGTTCACAATCATGAGGCCCCGTGTACTGGTTACTACACCCAAATGTCCTTGCTGCATTCTAATGATGATTGGACCCTGCACCCTTCTGCAAGCTCATACTCCTCCATATAA 588 0.4405 MDYYFGNPNNPNPYYGHSSALNMDSPSSDFILSDYLVLEDAVAHQESWSQSTETESLEKATSSDVSHGFADATSTTNMHMQCENKRKKTQVSQRITFRTRSPFEIMDDGYKWRKYGKKTVKNSPNPRNYYKCLGEECNVKKRVERDRDDSSYVLTTYEGVHNHEAPCTGYYTQMSLLHSNDDWTLHPSASSYSSI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03661 195 FunFam WRKY transcription factor 57 92 166 - -
Pste2g03661 195 SUPERFAMILY WRKY DNA-binding domain 99 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g03661 195 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 168 IPR044810 GO:0003700
Pste2g03661 195 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g03661 195 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g03661 195 MobiDBLite consensus disorder prediction 47 70 - -
Pste2g03661 195 Gene3D WRKY domain 93 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g03661 195 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03661 Pste-Chr2 39635363 39637993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03661 10 186 WRKY Transcription Factor Family AT5G64810 43.011 2.90e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g03661 WRKY 8e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03661 2 39635363 39637993 Pste2g03661 2 39635363 39637993 ECH
Pste8g01041 8 5471502 5476916 Pste2g03661 2 39635363 39637993 PCT