Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03640 ATGAGAAGACAACGGGGCGAATTGGAGAGATTTGATGAGATAGGGAAGAAGATTAAGAGAGAAGGAGATGTTTCTTCTCAAATGGGTAGAAGACATATGTTAGGCCCTCCTGGAACCCTAAACACTATCACCCCTTGTGCAGCATGTAAGTTGTTAAGAAGAAGGTGTGCCCAAGAATGTCCATTTTCTCCATATTTCTCTCCCCATGAGCCCCAAAAGTTTGCTTCTGTCCACAAAGTTTTTGGTGCCAGCAACGTCTCAAAGATGCTCATGGAAGTTCCAGAGTGTCAGAGAGCTGATGCTGCAAATAGTCTAGTTTATGAGGCTAATGTGAGACTAAGAGACCCCGTGTATGGATGCATGGGTGCAATTTCTGCTTTGCAACAGCAAGTTCAATCTTTACAAGCTGAACTAAATGCAGTGAGGGCTGAAATACTTAAATACAAACTCAGGGAAGCTAATAACATGATACCCTCCACTCATGTTGCAATGCTCCCTTCATCAGGGGCTGTTTCAATTGCTGCTCCACCGCCGCCGCCTCCTCCACCACTACCACCTCCTCCTCCTTCTCTTCCTCAAACTTCTTCTTCTTCTTCCCTGTACATCCAACAGAGGGATCCCACAACTTATACCACAATTTCAACGGATAATATTTCCTATTTTGGTTAA 669 0.4439 MRRQRGELERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKLREANNMIPSTHVAMLPSSGAVSIAAPPPPPPPPLPPPPPSLPQTSSSSSLYIQQRDPTTYTTISTDNISYFG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03640 222 MobiDBLite consensus disorder prediction 194 208 - -
Pste2g03640 222 MobiDBLite consensus disorder prediction 172 193 - -
Pste2g03640 222 Coils Coil 124 151 - -
Pste2g03640 222 Pfam Lateral organ boundaries (LOB) domain 45 142 IPR004883 -
Pste2g03640 222 ProSiteProfiles LOB domain profile. 44 145 IPR004883 -
Pste2g03640 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 41 182 - -
Pste2g03640 222 MobiDBLite consensus disorder prediction 170 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03640 Pste-Chr2 38957228 38960426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03640 30 173 AS2 family AT2G40470 84.354 4.32e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste2g03640 LOB 2.6e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03640 2 38957228 38960426 Pste2g03640 2 38957228 38960426 ECH
Pste7g02305 7 21384338 21408216 Pste2g03640 2 38957228 38960426 ECH