LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g03633	CGAGCAAAGAGATGGGAACCGTTAGTAACATTGGCTTCCCTTCAGTGTTGAGAGTTCCTTTAGATACGCAATTACTTTCAAAGCAGACGAAGAATAAATCATCTTGCGCTCTTATGGTTCCTCTTCCTCCTAATCCTAACTATTCTGTTAGCCTCACTCCAATATGTTGTAAACTATCAGAAAGTGAAATCGAGGAGAACCCCATCACCACGCCTTCTAAACCCAAGGACAGGATGGAACATTACAATATAGCTATGAGGACAATGATGAGGAACCCTTATGAGTATCATCACGATCTGGGTATGAATTATACTTTTATAACGGACAACTTGATTGTGGGCTCCCAACCACAGAAACCTGAAGACATAGATCATCTCAAAAAGGAAGAGGGTGTGGCGTACATTTTAAACTTGCAACAGGATAAGGATGTTGATTATTGGGGAATAGACTTGCAGTCAATAATAAACAGGTGTCGTGAACTTAAAATTAGCCATAACAGGATACCGGCTAGAGACTTCGATCCAGACTCATTGCGAAATGAACTACCTAAAGCAGTCTCATCCTTAGAATGGGCAATTTCTGAGGGAAAAGGAAGAGTTTATGTGCATTGTACTGCTGGACTTGGAAGAGCTCCAGCTGTGGCAATTGCTTATTTGTTCTGGTTTTGTGGCATGAATCTAAATGAAGCATATGATATGCTAACTTCAAAGAGACCATGTGGACCAAATAAAAGAGCAATACGTGCAGCTACTTATGATTTGGCTAAGAATAATCCATGGAAGGAGCCATTTGAGAATCTTCCCGAATATGCATTTGAGGATATAGCGGACTGGGAAAGGAACTTGATTCAAAATCGTGTCCGTTTCCTTCGTGGAACTTGACAACTTAGGTTTCTACATATCTTAGATTCCTACACAAACAGATTGACACCCTTGCTGGGATGGTACCACATGCCAGGATACTACTCAAGACTGGAGATTTTTCAAGCATAGTCATACTGATATGGGAATATATAGCTATATCGTGTACGAAATATCAATATAATATAAAGTGGTAATCGGTAAATGATCCATTTTGCGAATAATGTGAACAATAATTGTGGACTTAATAATATCTGAGAATGCAAAATGCTTAATTGATCTATAAGTGCACGTCTTAAGTAAAAGAATTATTTGTTTCCCGATCCTTTAGTTCCAAGCCCACTACAGTTTTTGTTCTATGCACAGCATTCTATTTCATGTTTTCATTTTTTTATTTTATAGGCAAACAATTTTTATAAAAAAAATAAAAATTAAAGAGCCCAAGTAGTGGATGAACAGCCTTAACAACTTTCTCACATTTAATTGCCACCACTATCACAACATACAACATGAAACTAGAATCATACAGCACTAAAACGCCAACC	1405	0.3786	MGTVSNIGFPSVLRVPLDTQLLSKQTKNKSSCALMVPLPPNPNYSVSLTPICCKLSESEIEENPITTPSKPKDRMEHYNIAMRTMMRNPYEYHHDLGMNYTFITDNLIVGSQPQKPEDIDHLKKEEGVAYILNLQQDKDVDYWGIDLQSIINRCRELKISHNRIPARDFDPDSLRNELPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYLFWFCGMNLNEAYDMLTSKRPCGPNKRAIRAATYDLAKNNPWKEPFENLPEYAFEDIADWERNLIQNRVRFLRGT	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g03633	289	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	176	235	IPR000387	GO:0016311\|GO:0016791
	Pste2g03633	289	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	87	243	IPR029021	-
	Pste2g03633	289	FunFam	Phosphoglucan phosphatase LSF2, chloroplastic	82	289	-	-
	Pste2g03633	289	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	99	256	IPR020422	GO:0006470\|GO:0008138
	Pste2g03633	289	SMART	dsp_5	99	249	IPR020422	GO:0006470\|GO:0008138
	Pste2g03633	289	Pfam	Dual specificity phosphatase, catalytic domain	120	239	IPR000340	GO:0008138\|GO:0016311
	Pste2g03633	289	PANTHER	DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN	45	257	-	-
	Pste2g03633	289	CDD	DSP_laforin-like	98	244	IPR045204	GO:0019203
	Pste2g03633	289	Gene3D	Protein tyrosine phosphatase superfamily	82	289	IPR029021	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g03633	Pste-Chr2	38787402	38790808	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g03633	47	289	Protein tyrosine phosphatase (PTP) family	AT3G10940	73.251	6.33e-136	384