Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03619 AACAAAACTGATATAAATGTGGCAAATCAAGTCTATTGCTTGTCTTCCAGACAGCTCCTAGGAATCTCTCAAACTCATGTTTGGGATTTGTCTCAAGTGACAACGTTGAGACTTGACAACACTCTTTTGGTGCATTTGGTGATTCTCTTGTTCTGCGTTTCCTCTGTTTTGGTTTCCGCGAGAGTTGCGCCTCTCTTGCAGAGCTATGGAAACCCAATTTTCAGATCAAACTTTCGTTCTATTTACGACACTTCCATGTACGGTGTGTTTCAACTGAGTAATGGGTTGGCTCAAACGCCTCAGATGGGATGGAATAGCTGGAACTTTTTTGCTTGCAATATTAATGAAACGGTCATTAAGGAAACGGCTGATGCACTGGTATCGACAGGGTTGGCTGAATTAGGTTATGTGTACGTTAATATAGATGATTGTTGGTCAGATGTGTCAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAAACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCGGGGATGTTTACATGTCAAGTTCGTCCAGGATCAATTTTCCATGAAACTGATGATGCAGATTTATTTGCCTCTTGGATTCTATTTTCTCATTTTCATGGTTTCCAAAACAGTATCAGATACTTATTCATGTTTAGGGGAGCCTGTGGAGGACCAGAGGACATAAACATGTATCTTTCTTGTGGATGCAAAAAATTAGTTGGTACTCTTTCTATTATGTTAAGGGATGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAACAACGATATCCACCCATGCGTGATGCTCTCATTGCAACTGGGCGTAAGATTTTCTACTCACTCTGTGAATGGGGTGTTGATGATCCTGCCTTGTGGGCAGATAAGGTTGGTAACAGTTGGCGCACAACTGAAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGACAAGTGGGCTGCATATGCTGGTCCTGGAGGATGGAATGACCCAGACATGTTGGAAGTTGGCAACGGTGGCATGACATACCAGGAATACCGTGCTCACTTCAGCATCTGGGCATTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCAGAAACGCTTGAGATTTTGACAAATAAAGAAGTCATTGCGATCAATCAAGACTCACTTGGAGTCCAGGGAAGGAAAGTTCAAGTTGCGGGAATAGATGTTTCCACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGAATTCATGTTTCTGTGAGGGATCTATGGCAGCACAAGGTAGTGAATAGAGATGCAGTGTCATCATTCAGTGCTCCAGTTGATATCCACGACTGTCAACTGTATATTTTCACTCCATTTACAGGATCTCACTCTGTTGAGTAGCTCATACTCCACCCATGGGTTTGGTTTTGGCGCATGTGTTCTGTATATACTAGTTGGATATCTGTTGGAGGAGATGATGCTATGACCGTTTGGGATTAACTGCTTTTACGAAAGTGAACATTTGCGTGTTTATTTCTCCTCTTTTGTTGCATCATTTGCTGGTCACACGAACCGAAGTTAGAGAATAATCTGATTTCTTGGTGTATACATCGCAAGCACATTGTTTTGTTTGTTTACAATATGGTTCCCTACTCGTGTATCATGATCACATAATTTCTGTCATAAACGTTATGGTTTAGAAACTATGGTGGAAAGAGAACTAATAATTTAGACTATGTACTTGAATAATTTTGGTCGACTTTTTTGGCAAATTTCATTCTTAATTCTAGTGTAAATTTCAGATAATTCCTAATAGATA 1888 0.4047 NKTDINVANQVYCLSSRQLLGISQTHVWDLSQVTTLRLDNTLLVHLVILLFCVSSVLVSARVAPLLQSYGNPIFRSNFRSIYDTSMYGVFQLSNGLAQTPQMGWNSWNFFACNINETVIKETADALVSTGLAELGYVYVNIDDCWSDVSRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGMFTCQVRPGSIFHETDDADLFASWILFSHFHGFQNSIRYLFMFRGACGGPEDINMYLSCGCKKLVGTLSIMLRDGVDYLKYDNCYNLGIPPKQRYPPMRDALIATGRKIFYSLCEWGVDDPALWADKVGNSWRTTEDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILTNKEVIAINQDSLGVQGRKVQVAGIDVSTITASWEALGLESGIHVSVRDLWQHKVVNRDAVSSFSAPVDIHDCQLYIFTPFTGSHSVE 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03619 489 SUPERFAMILY (Trans)glycosidases 252 412 IPR017853 -
Pste2g03619 489 Gene3D - 415 482 IPR013780 -
Pste2g03619 489 SUPERFAMILY (Trans)glycosidases 92 212 IPR017853 -
Pste2g03619 489 Pfam Alpha galactosidase C-terminal beta sandwich domain 429 478 IPR041233 -
Pste2g03619 489 Pfam Alpha galactosidase A 99 213 IPR002241 GO:0004553|GO:0005975
Pste2g03619 489 Pfam Alpha galactosidase A 262 412 IPR002241 GO:0004553|GO:0005975
Pste2g03619 489 CDD GH27 100 412 IPR002241 GO:0004553|GO:0005975
Pste2g03619 489 Gene3D Aldolase class I 251 414 IPR013785 -
Pste2g03619 489 Gene3D Aldolase class I 92 215 IPR013785 -
Pste2g03619 489 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 47 424 IPR002241 GO:0004553|GO:0005975
Pste2g03619 489 SUPERFAMILY Glycosyl hydrolase domain 428 480 - -
Pste2g03619 489 ProSitePatterns Alpha-galactosidase signature. 135 151 IPR000111 GO:0004553|GO:0005975
Pste2g03619 489 PRINTS Glycosyl hydrolase family 27 signature 171 192 IPR002241 GO:0004553|GO:0005975
Pste2g03619 489 PRINTS Glycosyl hydrolase family 27 signature 94 113 IPR002241 GO:0004553|GO:0005975
Pste2g03619 489 PRINTS Glycosyl hydrolase family 27 signature 368 389 IPR002241 GO:0004553|GO:0005975
Pste2g03619 489 PRINTS Glycosyl hydrolase family 27 signature 130 145 IPR002241 GO:0004553|GO:0005975
Pste2g03619 489 PRINTS Glycosyl hydrolase family 27 signature 347 366 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03619 Pste-Chr2 38583285 38597054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03619 43 487 Glycoside Hydrolase AT3G56310 60.504 0.0 551