LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g03612	CAACAAGTAAACCTCTCCATTCTTAAATCCTTTCTATACCCTACACAATGGCCATTGTAGCAACATCTACCATCTCTTTTCTCTTCTTTCTTCTTAACTTGTGCCTCAGAGGCACTTATGCTGACTATGGAGGTGGATGGCAAGGTGGTCATGCCACATTTTATGGTGGGGGTGATGCTTCTGGCACAATGGGAGGGGCTTGTGGTTATGGTAATTTGTACAGCCAGGGTTATGGTACTAACACTGCTGCACTCAGCACTGCTCTATTCAACAATGGCTTGAGTTGCGGGTCTTGCTATGAGATGAAATGTGACAATGACCCCAGATGGTGCCTCCCCGGTAGCATAATCGTCACTGCCACAAACTTCTGCCCCCCTAACTTTGCATTGGCTAATAACAATGGTGGTTGGTGCAACCCTCCCTTGCAACACTTCGATCTGGCTGAGCCTGCTTTCTTACAAATTGCTCAATACAAAGCTGGAATTGTTCCTGTTTCCTTCCGAAGGTTCACCATCAATGGTCACTCTTACTTCAACTTGGTTCTGGTGACAAATGTTGGTGGAGCTGGTGATGTTCATTCTGTGTCCATCAAAGGGTCAAGGACTGGCTGGCAAACCATGTCTAGAAACTGGGGACAGAACTGGCAAAGCAATTCCTACCTGAATGGCCAGAGCCTCTCTTTTCAGGTCACTTTAAGTGATGGCAGGACTATCACTAGCAACAACATTGTGCCTGCTAACTGGCAATTTGGACAAACATTTGAAGGGGAACAATTCTAG	779	0.4621	MAIVATSTISFLFFLLNLCLRGTYADYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCDNDPRWCLPGSIIVTATNFCPPNFALANNNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPVSFRRFTINGHSYFNLVLVTNVGGAGDVHSVSIKGSRTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTLSDGRTITSNNIVPANWQFGQTFEGEQF	243

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g03612	243	ProSiteProfiles	Expansin, family-45 endoglucanase-like domain profile.	49	153	IPR007112	-
	Pste2g03612	243	SUPERFAMILY	PHL pollen allergen	153	240	IPR036749	-
	Pste2g03612	243	ProSiteProfiles	Expansin, Cellulose-binding-like domain profile.	161	240	IPR007117	-
	Pste2g03612	243	PRINTS	Expansin signature	88	99	IPR002963	GO:0009664
	Pste2g03612	243	PRINTS	Expansin signature	197	218	IPR002963	GO:0009664
	Pste2g03612	243	PRINTS	Expansin signature	162	183	IPR002963	GO:0009664
	Pste2g03612	243	PRINTS	Expansin signature	226	242	IPR002963	GO:0009664
	Pste2g03612	243	PRINTS	Expansin signature	150	162	IPR002963	GO:0009664
	Pste2g03612	243	PRINTS	Expansin signature	61	75	IPR002963	GO:0009664
	Pste2g03612	243	PRINTS	Expansin signature	100	110	IPR002963	GO:0009664

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g03612	Pste-Chr2	38384484	38385889	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g03612	7	243	Expansin Gene Family	AT2G40610	77.016	3.23e-137	384

Showing 1 to 1 of 1 entries