Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03611 CGGGGCAAGAAAAGATAGGTTTAATAAAGAAATGGAGGTGTTTTGTGATTGATTGATTGATTGATTGAATTTGTAAGTGAGTGATCAGATGAACAAGGCTAAACGACGACGTAGGTGATCGTGGTCCCCCTTGATAGGCAGAGACCGCGCGAGTGCTTAAGCGGCGAGGGAAGGGAAGGAAAACGGAGCAGTGACCGGTTCAAACCCATCTTGCCGGAACAAACAAACAAACCAAGCCGATCACTCCATGTCGTTCCCTTACCATCGTCGAACCCAATCGGAGATGCATTTCCGGATCACCGACGACTTCGACCTCGAAGTCGATCTCTCTACGCCGCATTTCCAAGATCCCACTCCGCCCGACGAATCCGGCTCCAAACCCCCATCTCCCCAACCCGATATCAGCTCTCACCGCCGAAGCAATTCCGCCGATGCCTCTTCTTCTTCCTTGTTGGAAGGCATTGAGGCCAAGAAGGCCTTGTCCCCCGATAAGCTCGCTCAATTGTGGACCGTTGACCCTAAACGCGCCAAAAGGATTCTCGCTAATCGTCAATCTGCGGCGCGCTCTAAAGAGAGGAAAGCTTGTTATGTCTCCGAGCTTGAAAGAAAATTTCAATCTCTTCAAACGGAAGCAACCGCTCTTTCTGCTCAATTAAATCTTTTCCAGAGAGATACAAGTGGTCTGACTACTGAAAATACGGAGTTGAAGCTTAGATTACAAGCCATGGAACAACAAGCTAAGTTATGTGATGCTCTAAATGAAGCACTGAAGAAAGAAGTTGATAGGCTCAGGATTGCAACTGGAGAGATATTAATGCATGCCGATACCTATGGTTTGGGAATGCATCAACTTACATATTCTCAAGCTCCGTTCTTCTCCCATCATTCACAACATGGGCAGAGTGAATTTCATGCCATGCAAATGCCACAGTTGAATTCTGTCTCATCTAACGTCTCTACTTCCCATGAACCTCTGTTTGATCTAGACATTCCCTATGATTTGTCAGAAATGTTGTCAAGTGAATCCATCGGCCAATTTCAGGGGCTGGACATAGGCCACGGGGTTCCTCATTCCCTGATGCCAGATTGTCCCTCCGTTTCTGTTAATAAAGTCAACAATTCCTTTTGATTTAAATTTGACTGACCAACATGCCACCAGGCTTTTTATTGGAGTGTTCATAGACTGACATGAGTGAGACCTAAAGGTATCGATTTTTTGTTTTTATA 1227 0.4588 MSFPYHRRTQSEMHFRITDDFDLEVDLSTPHFQDPTPPDESGSKPPSPQPDISSHRRSNSADASSSSLLEGIEAKKALSPDKLAQLWTVDPKRAKRILANRQSAARSKERKACYVSELERKFQSLQTEATALSAQLNLFQRDTSGLTTENTELKLRLQAMEQQAKLCDALNEALKKEVDRLRIATGEILMHADTYGLGMHQLTYSQAPFFSHHSQHGQSEFHAMQMPQLNSVSSNVSTSHEPLFDLDIPYDLSEMLSSESIGQFQGLDIGHGVPHSLMPDCPSVSVNKVNNSF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03611 293 Coils Coil 115 135 - -
Pste2g03611 293 Pfam bZIP transcription factor 92 149 IPR004827 GO:0003700|GO:0006355
Pste2g03611 293 SMART brlzneu 88 152 IPR004827 GO:0003700|GO:0006355
Pste2g03611 293 FunFam probable transcription factor PosF21 91 144 - -
Pste2g03611 293 Gene3D - 91 144 - -
Pste2g03611 293 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 228 - -
Pste2g03611 293 MobiDBLite consensus disorder prediction 46 67 - -
Pste2g03611 293 Coils Coil 157 177 - -
Pste2g03611 293 CDD bZIP_plant_RF2 93 142 IPR044759 GO:0003700|GO:0006355
Pste2g03611 293 SUPERFAMILY Leucine zipper domain 92 146 IPR046347 GO:0003700|GO:0006355
Pste2g03611 293 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 90 153 IPR004827 GO:0003700|GO:0006355
Pste2g03611 293 MobiDBLite consensus disorder prediction 26 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03611 Pste-Chr2 38369628 38372927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03611 4 269 bZIP Transcription Factor Family AT2G40620 47.188 8.49e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste2g03611 bZIP_1 1.6e-08 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03611 2 38369628 38372927 Pste2g03611 2 38369628 38372927 ECH