Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03605 GTAAAGCTGGAATGGAAGGGGCAGTTTCGGAAAATGAAAAGCCAGGTGATCCTCCACGTCAAAAGCAAAACTGACCATGATGATGTGTCAGACACGTTAGAGCGGAACCTCCGCATGGATAGGCCACGTGGCATTTGTCCTAATTTATTTTGCTATCTACCAACTGGGGCCACTTTTGCCGTTAATAAAAACTGCACATTACTCCTTCCGTGTGTGGAAGTGAAACTCACACACCACACCAGAGAGAGAGAGAAACACTCACAGAGAGAGAGACAGAGAGACGTTGCTTTTAACGCCGGCGAGAACTTTCCCTCCGCACTCGCCGGAAAATCTGTTTTCCTCTTTGTTACTCTTCCGGCAAACTCCATATACTCCGTTCCTGCATTTCTCTGTTTCTGGATCGAGTCTTGTTCAACACTCTGGGTGCTGATTTTTCATCTTTTCTGCTTTGTTTCGCTTTGGAGCCCCTCAGAAAAACCGTACCTTGCTTGCGAACTACTTTTATTGGCTCTTCGTTACGTTTCATTCAACCGCAAATGCAATCGTTACGTCGTGTTCCTCACTTTCAACTTTAACCCCTTTTTCTCCCTCACTCTTAATCTAGCCGTTACTAAAATGCTGCGAGTGTTGTTTTCAAGCATGAGAGTTTTTGTTGTTCTTGTGTGGTTGTTGAAGGTGGTTTGTGTGGCGGTGAACCCTTCTCTGAACGACGACGTTTTGGGGCTGATCGTGTTCAAAGCCGATATACGAGATCCGAAGGGGAAGCTTGCGTCTTGGAATGAGGACGATGAAAGTGCGTGCGGGGGTAGTTGGGTTGGGGTTAAGTGCAACCCTAGATCCAACAGAGTAGTGGAGGTTAACCTTGAAGGGTTTTCCCTCTCTGGGAGAATAGGTCGAGGGTTGCAGAGGTTGCAGTTTCTCAGGAAGCTTTCTCTGGCGAATAATAACCTCACTGGGGGAATAAACCCCAACATTGCTCGAATAGATAGCCTTAGGGTCATTGACTTGAGTGGCAACAGTCTCTCAGGGGAGGTGTCTGATGATGTTTTCCGACAATGTGGGTCTCTCAGGACTGTTTCCTTGGCCAGGAACAGGTTTTCTGGGACCATTCCCTCTTCTTTGGGGGCGTGTTCTGCTCTTGCTGCTATTGACCTTTCTAATAACCAGTTTTCTGGTTCTGTTCCCTCTGGGATTTGGTCTTTAAGTGCTCTCAGGTCTCTGGATTTGTCTGATAACTTGTTGGAGGGAGAGATTCCTAAGGGGGTTGACGCCATGAAGAATTTAAGGAGTGTTAGTGTTGTGAGGAACAGGTTGACTGGGAATGTTCCTTATGGGTTTGGGAGTTGTTTGCTTTTGAGGTCCATTGATTTAGGGGAGAATTCTTTCTCTGGGAGTATTCCTGGGGATTTTAAGGAACTGGCATTGTGTGGTTACCTTAGTTTGAGAGGGAATGCTTTCTCCGGAGATGTTCCTGAGTGGATTGGAGAAATGAAAGGGCTTGAGACGTTGGACCTTTCAAACAATGGGTTTACTGGTCAGGTGCCCTACTCTATTGGAAATCTTCAGTCATTGAAGATGTTGAATTTTTCTGGGAATGGTTTCACCGGTAGTCTTCCAGAGTCTATGGTGAATTGCACGAAACTTTTGGTGTTAGATGCCAGCCGGAATTCAATGTCGGGAGGGCTGCCCTCATGGATATTCAAGTCAGATTTGAACAAGGTTATGGTGTCAGAGAATGGACAGAGTGGTAGCAAGAAAAGCCCTTTGTTTGCCTTGACTGAAGTTGCGGGTCAAAGTTTCCAAGTTTTGGATTTGTCACACAATGCATTTTCTGGTGAAATCACCACTGCTATCGGAGGTTTAAGCAGCTTGCAGGTTTTGAATTTAGCAAATAACTCTCTAAGAGGTCCTATACCAGCTGCTGTTGGTGAATTGAAAACATGTTCTAGTCTTGATTTGAGCTACAATAAACTGAATGGAAGCATACCTTGGGAAATAGGAGGAGCTGTGTCATTGAAAGAACTGGTATTGGAAAAGAATTTCCTGATTGGGAAAATTCCAACGTCAATTGAGAACTGCTCTTTGCTGACAACTTTGATTCTGTCCAAGAACAAGCTGAGTGGCACAATACCTGCAGCAATTGCAAAACTTACCAACTTGCAAACGGTGGACTTATCATTTAACGATCTTAGAGGAAACCTTCCTAAGCAATTGGCCAACCTTGCCAATCTTCTTACCTTCAATTTATCTCACAACAACCTTCAGGGTGAACTGCCGGCTGGTGGTTTTTTCAACACCATTTCGCCTTACTCTGTTTTTGGCAATCCATTTCTCTGTGGTGCTGCAGTAAATAAATCATGCCCTGCTGTCCTACCAAAGCCTATTGTTCTAAATCCAAACACTTCTACTGACACTGGCCCAGGTTCATTGCCTCCAAATTTGGGTCACAAAAGAATCATCCTCAGCATTTCGGCACTCATTGCCATTGGTGCTGCTGCTGTCATTGTAATTGGTGTTATTAGCATCACTGTTCTCAATCTCCGTGTTCGCTCCTCTGCATCTCGAGATGCAGCTGCCATCACATTTTCTGCAGGGGATGAATTCAGCCGTTCCCCCACTACAGATGCCAACTCTGGCAAACTTGTCATGTTTTCAGGTGAGCCTGATTTCAGTTCTGGAGCGCATGCTTTGCTTAATAAGGATTGTGAGCTTGGGCGTGGAGGATTTGGAGCAGTGTACCAAACGGTTCTTAGAGATGGGCATTCAGTTGCTATAAAGAAGCTCACTGTATCAAGCCTTGTCAAGTCTCAAGAAGATTTTGAGCGAGAAGTGAAGAAGCTAGGGAAAATCAGGCACCAAAACCTTGTGGAACTTGAGGGTTATTATTGGACTCCATCACTACAGCTCCTCATATATGAGTATGTCTCTGGTGGTAGTCTGTATAAGCATCTCCATGAAGGATCTGGTGGAAACTTCCTCTCATGGAATGAGAGGTTTAATGTAATTCTCGGAACAGCAAAGGCCTTGGCACATTTGCACCATTCCAACATTATTCACTATAACATTAAGTCAACCAATGTCCTTCTTGATAGTTATGGTGAACCAAAAGTAGGGGATTTTGGCCTAGCAAGACTGTTACCAATGCTTGATCGATATGTTTTGAGCAGCAAAATTCAGAGTGCACTGGGCTACATGGCACCAGAGTTTGCCTGCAAAACAGTTAAAATCACCGAGAAATGTGATGTATATGGGTTTGGTGTTTTGGTTTTGGAAATCGTTACAGGGAAGAGGCCAGTTGAATACATGGAGGATGATGTGGTGGTACTTTGTGACATGGTGAGAGGGGCTTTGGAAGAGGGAAAGGTGGAGGAATGTATTGATGAGAGGCTCCAAGGGAAGTTCCCGGCAGAAGAAGCTATTCCTGTGATGAAGCTAGGCTTAATATGTACTTCTCAAGTGCCATCTAACAGACCTGACATGGGAGAGGTAGTTAACATATTGGAGCTGATAAGATGTCCCTCTGAAGGTCAAGAAGAATTGGGATGAATTAACTTGCGATTTTCTTTATTAGGAAATGATAGACAATGGGTTTTCCGGGGAAGAAGAATCCGGTTTTATTTATTAAAGAGAAATTATTTGTTGCAAAATATTTACTTTTCATTGTAATTTTTTTCCTTGTTAGTCGCTAGTTGTATGCCTTAAGATTTCTCTTTCTCTTATGTTATGCTACACTACACCTAGGATGCCGGATTCCTTTTCACCGGGTTCCATTTTGGACCCCCCACCCCCCTTTTGAAAATTGTTGCTCAATTACTGATCTTTCATATTCTATCTTGTTTGTTTTGGTGTCGCA 3853 0.4404 VKLEWKGQFRKMKSQVILHVKSKTDHDDVSDTLERNLRMDRPRGICPNLFCYLPTGATFAVNKNCTLLLPCVEVKLTHHTREREKHSQRERQRDVAFNAGENFPSALAGKSVFLFVTLPANSIYSVPAFLCFWIESCSTLWVLIFHLFCFVSLWSPSEKPYLACELLLLALRYVSFNRKCNRYVVFLTFNFNPFFSLTLNLAVTKMLRVLFSSMRVFVVLVWLLKVVCVAVNPSLNDDVLGLIVFKADIRDPKGKLASWNEDDESACGGSWVGVKCNPRSNRVVEVNLEGFSLSGRIGRGLQRLQFLRKLSLANNNLTGGINPNIARIDSLRVIDLSGNSLSGEVSDDVFRQCGSLRTVSLARNRFSGTIPSSLGACSALAAIDLSNNQFSGSVPSGIWSLSALRSLDLSDNLLEGEIPKGVDAMKNLRSVSVVRNRLTGNVPYGFGSCLLLRSIDLGENSFSGSIPGDFKELALCGYLSLRGNAFSGDVPEWIGEMKGLETLDLSNNGFTGQVPYSIGNLQSLKMLNFSGNGFTGSLPESMVNCTKLLVLDASRNSMSGGLPSWIFKSDLNKVMVSENGQSGSKKSPLFALTEVAGQSFQVLDLSHNAFSGEITTAIGGLSSLQVLNLANNSLRGPIPAAVGELKTCSSLDLSYNKLNGSIPWEIGGAVSLKELVLEKNFLIGKIPTSIENCSLLTTLILSKNKLSGTIPAAIAKLTNLQTVDLSFNDLRGNLPKQLANLANLLTFNLSHNNLQGELPAGGFFNTISPYSVFGNPFLCGAAVNKSCPAVLPKPIVLNPNTSTDTGPGSLPPNLGHKRIILSISALIAIGAAAVIVIGVISITVLNLRVRSSASRDAAAITFSAGDEFSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLRDGHSVAIKKLTVSSLVKSQEDFEREVKKLGKIRHQNLVELEGYYWTPSLQLLIYEYVSGGSLYKHLHEGSGGNFLSWNERFNVILGTAKALAHLHHSNIIHYNIKSTNVLLDSYGEPKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEIVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEECIDERLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03605 1181 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 975 1176 - -
Pste2g03605 1181 Gene3D Transferase(Phosphotransferase) domain 1 975 1179 - -
Pste2g03605 1181 ProSitePatterns Protein kinases ATP-binding region signature. 904 927 IPR017441 GO:0005524
Pste2g03605 1181 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 517 791 - -
Pste2g03605 1181 Gene3D Phosphorylase Kinase; domain 1 892 974 - -
Pste2g03605 1181 SUPERFAMILY RNI-like 454 765 - -
Pste2g03605 1181 Gene3D Ribonuclease Inhibitor 515 791 IPR032675 -
Pste2g03605 1181 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 236 516 - -
Pste2g03605 1181 ProSiteProfiles Protein kinase domain profile. 898 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03605 1181 SUPERFAMILY Protein kinase-like (PK-like) 902 1165 IPR011009 -
Pste2g03605 1181 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 892 974 - -
Pste2g03605 1181 Pfam Leucine rich repeat N-terminal domain 236 277 IPR013210 -
Pste2g03605 1181 Pfam Leucine rich repeat 355 414 IPR001611 GO:0005515
Pste2g03605 1181 Pfam Leucine rich repeat 601 658 IPR001611 GO:0005515
Pste2g03605 1181 Pfam Leucine rich repeat 499 557 IPR001611 GO:0005515
Pste2g03605 1181 Pfam Leucine rich repeat 671 730 IPR001611 GO:0005515
Pste2g03605 1181 SMART LRR_typ_2 328 352 IPR003591 -
Pste2g03605 1181 SMART LRR_typ_2 401 425 IPR003591 -
Pste2g03605 1181 SMART LRR_typ_2 497 520 IPR003591 -
Pste2g03605 1181 SMART LRR_typ_2 717 740 IPR003591 -
Pste2g03605 1181 SMART LRR_typ_2 741 765 IPR003591 -
Pste2g03605 1181 SMART LRR_typ_2 521 545 IPR003591 -
Pste2g03605 1181 SMART LRR_typ_2 621 645 IPR003591 -
Pste2g03605 1181 CDD STKc_IRAK 904 1170 - -
Pste2g03605 1181 Gene3D Ribonuclease Inhibitor 236 514 IPR032675 -
Pste2g03605 1181 SUPERFAMILY L domain-like 268 516 - -
Pste2g03605 1181 Pfam Protein tyrosine and serine/threonine kinase 900 1166 IPR001245 GO:0004672|GO:0006468
Pste2g03605 1181 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 535 1170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03605 Pste-Chr2 38215424 38220347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03605 216 1181 Receptor kinase-like Gene Family AT3G56370 68.724 0.0 1293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pste2g03605 PK_Tyr_Ser-Thr 3.8e-42 CL0016