Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03601 CCCACGTCAAAACGTAAACACTTAGAACCCATGGAAGAAGTAATAAATTCGATTCGAGATGCTTGTAAATTGGTTCAAACCCTTGAACAAGACCTACCCAACCTGGCGAACCAGCCAGGTATGCTGTCCCTGTCCATTGATCAGATAACTGAGGCGTTCGATGCCGCCAAACTAAGGTTGTTACTTTTCCCCCGACACCAAACCTCAGACTCCTCTCCTCCACCGTTGCTTCATGAAAGCACTCAGCAGCCTCAGATGGATGCTACTCTAATGCAGGAATGGCTAAGGTCCAGTCACGCATTAACGATGGACCAGTTGTTCCATGCTGCAAGGACCACCTTGCACATTGTTGAAATGGAAGCCAAAGATGGGGAAGATCACCAAATCAAGGGATCTCAAGGAGACCTCCAAGGAATCCATGCATCTCCTTCACGACCACGGAGAAGAAGCAGTGAAGCTAATCAAGAGAAGAGAAAAGTTATGGTTCCTGCCCCACAGTTTGGAAACACAGAAATGCCACCAGAGGATGGATTCACTTGGAGGAAATATGGCCAGAAAGAAATACTTGGCTCCAAGTACCCAAGGAGTTACTACAGGTGCACACACCAAAAGCTGTATGAATGCCAAGCGAAGAAGCAAGTGCAGCGACTTGATAGAAATCCAGAGATATTCGAAGTAACATACAGAGGCAAACACACATGCCACATGTCCTCAACAGCACCATCATCACTTCCATTACAACAACTACTGGTGGACATAACGCAGAACAATAATACGGTTTCATCTCAGTTGTCCCCAACGACGATGAACCTCAGCCTCCACGCCGCCGCCAGCAGTGGCAGTGGTGGACCCTCCACTTCAAGATACGCCGGTGATTATCCTGTGGTGGATATGGCCGATGCTATGTTCAACTCTGGTAGCAGCAGCGGCAATAACAGCATGGAATTTCTCTTCTCTCCTGCTGAAGATAATACTGATCCAAAGTAAAACATCATCATTATTGCCTCTTCAAAAACGGAAAATATTACATATATATTTCTACTCAGAATTATATAATCAACCAATAATGAATTAATTGTATCACTACACTCAACACTTATTACTAGAAAAAGATTTTGAC 1120 0.4482 MEEVINSIRDACKLVQTLEQDLPNLANQPGMLSLSIDQITEAFDAAKLRLLLFPRHQTSDSSPPPLLHESTQQPQMDATLMQEWLRSSHALTMDQLFHAARTTLHIVEMEAKDGEDHQIKGSQGDLQGIHASPSRPRRRSSEANQEKRKVMVPAPQFGNTEMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKQVQRLDRNPEIFEVTYRGKHTCHMSSTAPSSLPLQQLLVDITQNNNTVSSQLSPTTMNLSLHAAASSGSGGPSTSRYAGDYPVVDMADAMFNSGSSSGNNSMEFLFSPAEDNTDPK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03601 318 MobiDBLite consensus disorder prediction 299 318 - -
Pste2g03601 318 MobiDBLite consensus disorder prediction 114 150 - -
Pste2g03601 318 Gene3D WRKY domain 154 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g03601 318 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 60 257 IPR044810 GO:0003700
Pste2g03601 318 ProSiteProfiles WRKY domain profile. 165 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g03601 318 SUPERFAMILY WRKY DNA-binding domain 161 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g03601 318 Pfam WRKY DNA -binding domain 165 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g03601 318 SMART WRKY_cls 164 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03601 Pste-Chr2 38119848 38123819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03601 1 308 WRKY Transcription Factor Family AT2G40740 38.558 3.82e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g03601 WRKY 1.3e-26 CL0274