Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03600 GGGGACATTTTCCATTCTCTTTCCTGGCAAAAGCCTCTCCTCTATGTATTCCCTAATCCAAATTCCAAAGACGGACCAAAATACATAACCTCCTTAGCCACAAATAATGACAACTTCCTCAGCCTCTGCTAATACAAGACTCATTAGGGAACTTGTTCAGGGTCACCACTCCGCCACTCGCCTCAAGCTTCTTCTTCAGAACCCTATTGCTCCTGATTGCTCCCTCTCTGCCAAAGAACTTCTCTCCAATGTGCTCAGATCTTTCTCTCAAACTCTCTCTCTCTTGAATTCTTCTCACCACAATCTCCCGCTTTCCCCTCCCCAACATGCTACCTTTGATCTCAGGTCTCAGGATTCCACTCTGTGTTCCAAGAGATCGTTGCCTGTCCCCAAGGATCGGAGAGGTTCCTACAAACGAAGGAAGACTGAGCAGACATGGACCATAGTTTCCCAAACTACTGATGATAAATATGCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAGGAGTTACTTTAGGTGCACTCGAAAGTTTGAACAAGGTTGCCGAGCAACCAAACAGGTGCAACGGATACAAGAGAATCCTGATATGTTCAACATTACGTACATTGGCTTTCACACATGCAAAGACAGCCTTATGGCTCCACAAATGGTCACACATTCTGAAACTTGGGACTCTTATCTCGAGAATTCTCTTCCTTGTGACGACTCAAATGTGCCAAATGAGCAACTCCATGATACCCCTCTCGTTGGATCACAAGCCCTCATTATAAAACGAGAATATCCCAAGGATGAGACTGATCCGAGTGATCTTACAGATGCAAACCTGTGGTCTGATTTGAAGGACTTTGAACTATCCAATGACAAGTCTGACTTGAAAATAGGATCTGAAAATGCAGATACCGTGTATTCATGTACTGGCTCTCGAAGGTTGCACATGGATTTTGGGATATTCTCTTCTCATTTCGGCACCGACGACTGCCACTTTGATGAAAGCCAATTTTTGTAGTTACCTTCCGTAATCTTAACCCTGTATTGTTCAGATTGAATATTTAGATCTTGCATTTTCCATGTTTCATGTACCATATATGAGAATAATTTTGATCATTCCAACATGCCAACAGTCAATAAAATGTAATGTATGTCGTCTGTCTAAAATGCATGAAAAGTTTATTAAATGGAAGAATGAATCAACTATTTGTGGATGCTACATATGTAGGGTAGGCCATGCTAATATATATATAGCTTGATTTTCTTTTGGTCTCCATGTAGGGTAGGTCATGCATGAGCCTATGAACCCAAGCGAGATGAAGATATTTTTATCAAGGGTTGTGGACTTGTGGGAGGTTTTTTCCTTACAGGTCAAATATTAGTTTTTGTTGATGGTAAGATTGAACCGAGACCGTTTTCCATTTTCATCTTTTTTCCTAACTCGACGATCTTATAATTCCTAAGGACGTGTACTATAAAGAAGAATTGATCAAGTG 1502 0.4108 MTTSSASANTRLIRELVQGHHSATRLKLLLQNPIAPDCSLSAKELLSNVLRSFSQTLSLLNSSHHNLPLSPPQHATFDLRSQDSTLCSKRSLPVPKDRRGSYKRRKTEQTWTIVSQTTDDKYAWRKYGQKEILNSQFPRSYFRCTRKFEQGCRATKQVQRIQENPDMFNITYIGFHTCKDSLMAPQMVTHSETWDSYLENSLPCDDSNVPNEQLHDTPLVGSQALIIKREYPKDETDPSDLTDANLWSDLKDFELSNDKSDLKIGSENADTVYSCTGSRRLHMDFGIFSSHFGTDDCHFDESQFL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03600 305 ProSiteProfiles WRKY domain profile. 119 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g03600 305 Gene3D WRKY domain 103 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g03600 305 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g03600 305 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 195 IPR044810 GO:0003700
Pste2g03600 305 Pfam WRKY DNA -binding domain 119 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g03600 305 SUPERFAMILY WRKY DNA-binding domain 115 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03600 Pste-Chr2 38114658 38117528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03600 11 210 WRKY Transcription Factor Family AT3G56400 41.346 2.23e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g03600 WRKY 5e-25 CL0274