Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03584 GGCAAGGCAATTGATCCGTTGGAATGGAAGGAGGAAGGAGGAAGGAAAGGAAAGAAAAGTATAACAATAATAATATCCAATGAAACGCGTTTGATTATGATCATTCATTCATCAACGTCAACCTCAACCTCGTGTCCTCTCTCACACAGTCACACACAAATATCGAAATTTGAAAGAGAAGAAGGTTTCAGCTTCCTGACCTTGACTTTTCTCCTCCCTTCTTCTGCTTCCACCGTGTCCATTGCTGGATCCGCGTTCACATTAAACCCTCTCATCGCGCACTAACCCTCTCTCACCATCTGCATCTTCTCTTCCCCCATTCTTTTTTTCTTCATCGCAATTAATTCCACGCTAAATAACCTAATCCATAACGCAAAACCAATGGTTTCGCAATATCCGTGATTGGAGGACGCAAAAAAGGAGTACGCGGTAGGTGGAGCCAAAGAGGTTGGTTACTTGGTTAGGGTTTTGACGAGATGGAATCGTCGCCGTCCTCTTCTTCGTCCTCGTCGTCGTTGTCTTTGTCTTCTTCATCCTCTGGAAGCGACACCAGCGGTGGTGGCGCTGTCACGTGGTTCGGGATGACTTTCCCGTTCCGTTCTCCGCTCTCTCTCGTCATGGATTACTGTGCGCGCGAGGACTCCGCGGAGCCGGTGATTATCATTCCCCGCACGCGCCCTCGGTTTCAGGTGCACGCCGAATCGGCTTCTTCTTCGGGGTCTGAATCCGACGACAATGCGTGCAACGGCGCCGAGGAGGTTGCGATACGCATAATTGGAGCCGGCGACCAGGAGAGCGGTTCGTTGCCGTCGTCGTCGTCGTCGAGGGGTCGGACTGGGGAACAAGGGTGTGAGGAGGCGATGGTTGGGAGGAGCGGGATGCTGTCGTCTGAGGCTCGCCGGCGAATGGTGGAGGAGAGGGTGCCGTTGGTGTCTCTGGATGATGGGGTTGGTGGCGGTAGGGATTCTTCTTCATCGTCTTCGACATATCAGAGGTATGATATTCAGCAGGTTGCCAAGTGGATTGAGCAGATTCTACCGTTCTCTCTCTTGTTGTTGATCGTTTTCATTCGCCAGCATTTGCAAGGGTTTTTTGTCACAATTTGTATATCCGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAAGCAGACAGCCTTGAAGGGAGATCGGAAAGTCTCTGTTCTACTTGGTATCACTTTTGCCTTTATGCTGCATGTGATATGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCACTGGCCATGCTTCCACCAAAAGCAACACCACCTTTCTGGCATACAATATTCATCATTTTGGTTAATGATACATTGGTGCGGCAAGCAGCAATGGCTTTCAAATGTTTGTTGCTTATTTACTACAAAAATGGAAGAGGCCATAACTTCCGTCGGCAGGGTCAAATGTTGACTCTGGTTGAGTACACTCTGCTGCTGTATCGTGCTTTATTGCCAACACCAGTTTGGTACCGATTTTTCTTGAACAAGGACTATGGAAGTCTCTTTTCCTCACTGACCACAGGATTGTATCTAACTTTTAAGCTAACATCAGTAGTTGAGAAGGTTCAATGCTTTGTTTCTGCCTTAAAAGCATTATCAAAAAAGGAAGTTCATTATGGGGTTTATGCCACAACGGAACAGGTGAATGCTGCTGGTGACATGTGTGCTATATGCCAGGAGAAGATGCAGGCTCCCATATTATTGAGCTGTAAACACATGTTCTGCGAGGATTGTTTTAAGCTCAATTTGTTTGGCATGTTGGGTCATGTTTTTGAGCCAAAATCTTCTTGGAAAATGTCACCTTCTCTGGTTTGGTAA 1841 0.4699 MESSPSSSSSSSSLSLSSSSSGSDTSGGGAVTWFGMTFPFRSPLSLVMDYCAREDSAEPVIIIPRTRPRFQVHAESASSSGSESDDNACNGAEEVAIRIIGAGDQESGSLPSSSSSRGRTGEQGCEEAMVGRSGMLSSEARRRMVEERVPLVSLDDGVGGGRDSSSSSSTYQRYDIQQVAKWIEQILPFSLLLLIVFIRQHLQGFFVTICISAVMFKSNEIVKKQTALKGDRKVSVLLGITFAFMLHVICIYWWYRNDDLLYPLAMLPPKATPPFWHTIFIILVNDTLVRQAAMAFKCLLLIYYKNGRGHNFRRQGQMLTLVEYTLLLYRALLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTSVVEKVQCFVSALKALSKKEVHYGVYATTEQVNAAGDMCAICQEKMQAPILLSCKHMFCEDCFKLNLFGMLGHVFEPKSSWKMSPSLVW 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03584 454 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 69 427 IPR044235 GO:0061630|GO:1904294
Pste2g03584 454 Pfam RING-type zinc-finger 404 428 IPR027370 -
Pste2g03584 454 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 379 433 IPR013083 -
Pste2g03584 454 SUPERFAMILY RING/U-box 395 429 - -
Pste2g03584 454 MobiDBLite consensus disorder prediction 1 28 - -
Pste2g03584 454 MobiDBLite consensus disorder prediction 106 121 - -
Pste2g03584 454 MobiDBLite consensus disorder prediction 101 129 - -
Pste2g03584 454 ProSiteProfiles Zinc finger RING-type profile. 404 428 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03584 Pste-Chr2 37891042 37898716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03584 41 427 C3H Transcription Factor Family AT5G01960 61.757 3.74e-168 478