Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03530 GTTGGATCCGCTGTTAAACTTAACACCCTGGCCTTTTTCTTTGTTGCTTTTTTATTTTTTACCCTCCAGATATTGTGTGCTTCTTCTTCAGACACGATTCTGAATTCTGATGCTGTAGGGCGTGATTCGGTTGGAATATGAGGGAAGTGGTGATGAGTGGAGACAAGTCAGTGAGAGGGGAGAAGGAAGATAGTGGGAGTGGGAGCAAGGGCGAATTGGAGGGGTTGATGAGGTGGGAGAAGTTCTTGCCAAGGATGATTTTGAGGGTGCTTTTGGTTGAAGCCGATGATTCCACTAGACAGATTATTGCTGCGCTTCTTAGAAAATGCAGCTACAAAGTGGCTGCTGTTCCTGATGGCTTAAAGGCGTGGGAATTACTCAAGGGAAGACCACGCAATGTTGATCTAATACTCACAGAAGTGGATTTGCCGTCCATATCTGGCTATGCACTTCTCACATTAATCATGGAGCATGAGATTTGCAAAAACATTCCTGTTATAATGATGTCTTCCCAAGATTCAATTAGCACAGTATACAAATGCATGTTGAGAGGTGCTGCTGATTATCTTGTTAAACCTATTAGAAAAAATGAACTGAGGAATTTGTGGCAACATGTTTGGAGAAGACAAGCATCAGCCACTGGAAATAATGGTCCCCAAGATGAGAGTGTTGCACAACAGAAGGTTGAAGCCACCGCAGAAAATAATGCTGCTGGTAATCATTCAAGCGGTGATGCTGCTTGCATTCAGAGGAATATGGAATTAATTGAGAAAGAAAGTGATGCGCAGAGCTCTTGTACGAAGCCTGACTTGGAAGCTGAGAGTGGTCCTGTCGTTAACATGCAGGAATTTTCTCCGCTGAAATGTGGGGAAGCATATTCAAATGGAACAGGGACTCAAGAGGTTGAAACATGCATTCGTTTAGGCCAGACATCGGTGATGCATGACAGTCATGCTGGAGGATTGGCTGAGAGTATCCATAAAAACTGTGAGGCAAGCACAACCAATGACAAGGATGCTGATCCAGAATATTTTGGTAATACTAGCATCAGTGGTGAGGCTCATGAAAATCACTATGTTCAAATCAACTCTTCCAAGGAAGCTATTGACTTGATTGGAGCATTTCATACTCACCCAAATTGCAACCTAAAAAATTCCATAGTTAATTGCATGGGCCAGTTTGACCTTTCTACTCAATTGGATCTTTCTCTGAGAAGATCTCGTCCCAGCTGCTTTGAGAATGAACTCACTGAAGAAAGGAACACCCTGATGCATTCTAATGCTTCAGCTTTTAAGCGGTACACTAATAGGCAATTGCAAGTCTCAACGCCTGCAGTGTTAATTAACTTCTCTGATCAGCAAAAAGAACAGAGAACAAATGGTGAGAAAAACGTCTCACACGTCACTACTGGCTGCAACTCAGATAGTTCAACACCTAGTATGCAAAGGTGTATTGTGTCTCCAACCACAGTCCAATCAAAAGAATCTGAGCTGGGAACCTCACACTCCCAGCAAGGGCATTCTTTCCCCATTCCAGTAAAGGGTGTAAGATTCAATGATCTATGCACAGCCTATGGTTCTGTACTTCCTTCAGTGTTTCGTTCACAGTCAGGTCCACCAACAATGCCGACTCCAAATTCAGTTGTGCTCCTTGAACCAAACTTTCAAGCAAATGCATTTTATCAGTCAAATATGAAAGAGAATTGTTCAGAGCAGCTTTATGAATATCATGCTCCAAATGGAAATAACAGCCAAAACCACATTGTATACTCACAGGAACACAAAACAGAACATGCTGAGGATAGAGGACGTATTTCTCCTACAGCTGATCAAAGCGTGTCAAGTAGTTTCTGTAATGGAAATGCAAACCATCTTAACAGCATGGGTTACGGAAGCAACTGTGGAAGTAGCAGCAATGTTGATCAAGTCAACACTGTCAGGGTAGCTTCAGAGAATAAGAATGTAGACCTCACAAACAATGCAAACGCTCATCGATCTATTCAAAGAGAAAAAGCTCTTAACAAATTCCGCTTGAAAAGGAAAGAGAGATGCTACGAGAAGAAGGTTCGGTATGAGAGCAGAAAGAAATTAGCAGAGCAGCGTCCCAGAGTAAAAGGACAATTTGTTCGTCAAGTGCATCCTGATCCTCTTGCTGCAGAAAAAGATGGCAAAGAATATGATCATTCACAGATTTCTGACTCGCTGGACAGGAGAGCATGAATTCTTAGTATACAGTTGCTTCAAAATTTTGTTTTCCTGAATCATTAAATACCAGAACCACTTGATCTGTATATGCTTTCTAAAACCATGTTTCTCATTTGCCCTTTCTCTAGATCGTGATATAAATATACCTAATGTATTATATCTTTGTAATTTTATACAGTTTATAGAGATCTTTGTGCCTTGTTATTTATTTATTTTTAAGGTTTTGTTTACTTACACGGAGTCACTGATTTTATCATGTAAGTTTTTATATAATACCATAACATTATATGTATCTATA 2502 0.4069 MREVVMSGDKSVRGEKEDSGSGSKGELEGLMRWEKFLPRMILRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPRNVDLILTEVDLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVWRRQASATGNNGPQDESVAQQKVEATAENNAAGNHSSGDAACIQRNMELIEKESDAQSSCTKPDLEAESGPVVNMQEFSPLKCGEAYSNGTGTQEVETCIRLGQTSVMHDSHAGGLAESIHKNCEASTTNDKDADPEYFGNTSISGEAHENHYVQINSSKEAIDLIGAFHTHPNCNLKNSIVNCMGQFDLSTQLDLSLRRSRPSCFENELTEERNTLMHSNASAFKRYTNRQLQVSTPAVLINFSDQQKEQRTNGEKNVSHVTTGCNSDSSTPSMQRCIVSPTTVQSKESELGTSHSQQGHSFPIPVKGVRFNDLCTAYGSVLPSVFRSQSGPPTMPTPNSVVLLEPNFQANAFYQSNMKENCSEQLYEYHAPNGNNSQNHIVYSQEHKTEHAEDRGRISPTADQSVSSSFCNGNANHLNSMGYGSNCGSSSNVDQVNTVRVASENKNVDLTNNANAHRSIQREKALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHPDPLAAEKDGKEYDHSQISDSLDRRA 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03530 693 Pfam Response regulator receiver domain 44 155 IPR001789 GO:0000160
Pste2g03530 693 SMART REC_2 42 157 IPR001789 GO:0000160
Pste2g03530 693 MobiDBLite consensus disorder prediction 408 435 - -
Pste2g03530 693 MobiDBLite consensus disorder prediction 648 662 - -
Pste2g03530 693 ProSiteProfiles CCT domain profile. 623 665 IPR010402 GO:0005515
Pste2g03530 693 MobiDBLite consensus disorder prediction 1 26 - -
Pste2g03530 693 ProSiteProfiles Response regulatory domain profile. 43 161 IPR001789 GO:0000160
Pste2g03530 693 SUPERFAMILY CheY-like 42 168 IPR011006 -
Pste2g03530 693 MobiDBLite consensus disorder prediction 166 198 - -
Pste2g03530 693 Gene3D - 40 238 - -
Pste2g03530 693 CDD psREC_PRR 44 147 - -
Pste2g03530 693 PANTHER TWO-COMPONENT RESPONSE REGULATOR 43 262 IPR045279 GO:0009736
Pste2g03530 693 MobiDBLite consensus disorder prediction 417 435 - -
Pste2g03530 693 Pfam CCT motif 623 665 IPR010402 GO:0005515
Pste2g03530 693 MobiDBLite consensus disorder prediction 648 693 - -
Pste2g03530 693 MobiDBLite consensus disorder prediction 669 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03530 Pste-Chr2 36884349 36889097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03530 16 667 Response Regulator Gene Family AT5G24470 40.916 4.97e-132 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pste2g03530 Response_reg 3.3e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03530 2 36884349 36889097 Pste2g03530 2 36884349 36889097 ECH