Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03513 CGAATCTTCGTCGTGGAATCTGAGGAAGTGTCAATGTCACAGCCAAGGCACAACAAGATGATGAGTCCAAACTTTGCAAAACAAGTTGGTGACACAACCTATACTAAGATCTTTGTTGGAGGACTAGCTTGGGAGACCAAGAGAGACACTCTCAAACGCTATTTTGATCAGTTTGGTGAGATCCTAGAGGCGGTTGTTATAACTGACAGAATCACTGGAAGATCAAAAGGATATGGCTTTGTGACCTTCAGGGACCCAAATTCTGCAATAAGAGCTTGTCAGAATCCCTATCCTGTGATTGATGGAAGGAGAGCTAATTGTAATCTTGCAGCTCTTGGTGCCCAGAAATTTGATCCATCTATAACAGGTCAAGTTGCACATTTTGACGACTCCTACTGTGGCCTATTCCCACTTTCAAATGTTTCAGGAAGGCAAAAATTTAGTAGCCCTTCATGGAATATGGCACCAATTCCATTGCAAGGCACCTCCACTTATTATAATCACATACCCCAATATCCGTTTCCGTATCCAGCCTACAGGTATCCTGGTTATCCCCACCCACAAGACTTAATGCACTACAATAACGCATATGGTGGACAGCAGCTTCCAATCCGCTGGTTTCCAGCATATTGCCAACCCTTTTATGGCCTTAGTAGACAGTTTATTCCAACAGCATATGTGAAAAAGGCACAGATCCCTGATATGTCACCTCAGGAGTTCTCAGTTGTTGGCTTCTCAGAACCTATTTCAGCTTCTCCCTCAATTTCCAGCACAGGGACAGGAACAGTGCCTACAACAGGAGTGCTAGAATCCCCCCAAGAACAGAAATCTTCAACTTAAAGCTATGATGAGGAGATTCCATCAATTGACTACTAGAATAGAGAAAGTAAAAAAGAAAAATGACACTGCTCAATAAACCAGGAAGCTCTAAGTACATTCCCATTGAGGTGGTCTAGCAAAGGAAATAAATCAAGCAATAACGTATTGAGGTTTTCCTTCCATGAAACAGATTATCTTAGAGACCAGACACTGATGAAACGAGTCCTGGATTTGTTCACTGTCTTTGAAAATTTTTACTTTTGAGAATTCTGGTGCATAGCATTCATTCTTTGGTTTTCCTTTATTCTTTCTTTTTAATACGGGATGCCTGCTACGTTATAGTTAAAAAGGAAAAAGAAAAAAAAAATTGCTTGTTATTATTCTTTTATTCATATATAGTTTACATTCCTATTTTGTGTTAGCTGTGAACTAAAATTGCAAGAGTAATATCAAAAATTATTTTTATGCTTC 1290 0.3953 RIFVVESEEVSMSQPRHNKMMSPNFAKQVGDTTYTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRITGRSKGYGFVTFRDPNSAIRACQNPYPVIDGRRANCNLAALGAQKFDPSITGQVAHFDDSYCGLFPLSNVSGRQKFSSPSWNMAPIPLQGTSTYYNHIPQYPFPYPAYRYPGYPHPQDLMHYNNAYGGQQLPIRWFPAYCQPFYGLSRQFIPTAYVKKAQIPDMSPQEFSVVGFSEPISASPSISSTGTGTVPTTGVLESPQEQKSST 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03513 279 PANTHER BOULE-RELATED 14 236 - -
Pste2g03513 279 CDD RRM_RBM24_RBM38_like 35 110 - -
Pste2g03513 279 MobiDBLite consensus disorder prediction 251 279 - -
Pste2g03513 279 SUPERFAMILY RNA-binding domain, RBD 14 110 IPR035979 GO:0003676
Pste2g03513 279 SMART rrm1_1 36 108 IPR000504 GO:0003723
Pste2g03513 279 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 94 IPR000504 GO:0003723
Pste2g03513 279 Gene3D - 5 120 IPR012677 -
Pste2g03513 279 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 112 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03513 Pste-Chr2 36490728 36492851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03513 31 111 C2H2 Transcription Factor Family AT2G19380 41.975 1.69e-14 71.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03513 2 36490728 36492851 Pste2g03513 2 36490728 36492851 ECH