Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03506 CTTGCCTTTTTCATTCTTTCTCTTTCTTCACTATCTGCTTTCCTATTTTCAGCTAACTTGTTGCTTTCATTTAATTTACTTATAGTATGAGTTATGGGTGAATTTGGCCTTTCACACACAGGAAAAAGAAGGAGTATCTGCCACACCAACACCAACACCAACACCAACACCAACGTTCTTGGGTTGGATGTCAAGGTGCTGCACAGCCCTGAAGCATTATTCCATAATAAGATGACCATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGCTGATGGCGATGGTCCCACGACTTACATGTCTTTTACTAATCACATAAACCTTGTTAGTGCTGCTTCTGTTCTTGGTCCTGCTATTGATGTTGGCTGTGGTGCTGCTCCTGCACCTGTAAGAACTTTGCAGCCTTTTGACATTTCTCCTTATACTACTCCCACCACTACCACCCTCTTCAAACCTTCAGATTGCATCTTTTTTAACAGAAAAAAAAAGGTGGGTCAAAAGAGAGAGACACATAGTGTGTGTTCTGTTCTGTCTAAGACTCTGAACATACTTGCGTTGTGTGTTACACTTACAGCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACGAGTGCACAATGGAGGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTCCTCATTCCCACTTCACTCACACCCTCTTCTCGCTCTTCCTGCATGGATGTTGGTTTCAATCTGAGGTTGGCAACTAGCACTGACCCTGAGCCAGGTAGATGTAAAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCCTAACCACAAGTATTGCGAGCGCCATATGCATAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAACACCACCACTCCCACTAGCATCAACAACAATAGCAACCACCAAATCAAGAGGGCTCGCCATGATTGTAATCCTTTTCCTACATCTGATGTTTCTGTGGCCATTTCCAACCCCACATCCAGAAAAGATGGATCTTCACCCCATTTTCTTGCCTCTACTACCAATCAGCCATACCTTGAATCTTCCCTCTCTCTTGCTAACTTTGGTCTCAAAGCTGCGAGTTTTAACTCCGTGGCTTCTGTTTCTGCAAATAAGGAACCAAGGGGTTTGGACTGGATGCTGAATGGAGATCCTATTGCTCTGGGTGCTTCTGACCCAGTATGGATGCATAACAAAGTTGGAATGAGCAGTGATAGTTCCTGTGACACCACAGAGCCTCAGTATCTGAATTCATTTGCACTATATAACTCTGGACTGGTCCAACAAAACAGACGTCATTCATTGTTCCAGAACCCCCTTGTTGTTCCCATGGAGAATCTCCAACCAGAAAAACCAAGGAGTTTTATTGATGCTTGGTCTAACGCTGAAAGCGATGGCAACACCAACAACAGCAAGAACTCTGCTGCATCAATTGGTAAATTATCCCTTTCTTGTCTTGATCTATCAATGGGGGGTGGTGGTGGGAATGAAGATGTGGGTAATGTTAACATGGGTCTTGGCCTAATGGAGCCTAATGGAAACACACACAATGATACTAAAATGTGTCTCTCAAATTGGCTCAACCCAGCAGCACCATGGGTGGCTTCAGCACTTGGGGGTCCTCTAGCTGAAGTTCTAAGGTCAAGCGCAGTCGCTGGCACAAATGAAGCAACCTCAGCTGCCACTACAAATGTTGAATCTAACAGCCCTCTGGGAACAATGGTGTCATCTCCATCTGGGGTGTTGCAGAAAGCGCTTGTTTCATTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTGCATCATCAAGGGCCAATTCTGAGATGTCCTTGCTCAGGTTTCAATCAAATGTAAATTAATTAGCATTTTCTTGTTAAGTTCATTTCAAATGGGGTAATAGTATTATTCTGCATATTTCAACTGTGCTGTCCACTCGGATAGGAATAGGGCCTATGGCCTAGTGTTCAGGACGGTTTGTTATATACTAAAAAACCTCTGGTGAACAACCTGTGTTTCTGTTTATGTGATGAGGACTCTTTGCAGCTTTAAA 2138 0.442 MGEFGLSHTGKRRSICHTNTNTNTNTNVLGLDVKVLHSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAADGDGPTTYMSFTNHINLVSAASVLGPAIDVGCGAAPAPVRTLQPFDISPYTTPTTTTLFKPSDCIFFNRKKKVGQKRETHSVCSVLSKTLNILALCVTLTAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIPTSLTPSSRSSCMDVGFNLRLATSTDPEPGRCKRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTNTTTPTSINNNSNHQIKRARHDCNPFPTSDVSVAISNPTSRKDGSSPHFLASTTNQPYLESSLSLANFGLKAASFNSVASVSANKEPRGLDWMLNGDPIALGASDPVWMHNKVGMSSDSSCDTTEPQYLNSFALYNSGLVQQNRRHSLFQNPLVVPMENLQPEKPRSFIDAWSNAESDGNTNNSKNSAASIGKLSLSCLDLSMGGGGGNEDVGNVNMGLGLMEPNGNTHNDTKMCLSNWLNPAAPWVASALGGPLAEVLRSSAVAGTNEATSAATTNVESNSPLGTMVSSPSGVLQKALVSLSDSSSNSSPRVASSRANSEMSLLRFQSNVN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03506 617 ProSiteProfiles WRC domain profile. 239 283 IPR014977 -
Pste2g03506 617 ProSiteProfiles QLQ domain profile. 182 217 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste2g03506 617 MobiDBLite consensus disorder prediction 271 297 - -
Pste2g03506 617 PANTHER GROWTH-REGULATING FACTOR 5 152 475 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pste2g03506 617 MobiDBLite consensus disorder prediction 280 297 - -
Pste2g03506 617 Pfam WRC 240 282 IPR014977 -
Pste2g03506 617 SMART QLQ_2 181 217 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste2g03506 617 Pfam QLQ 182 214 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03506 Pste-Chr2 36363216 36366116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03506 428 593 GRF Transcription Factor Family AT5G53660 34.254 1.54e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pste2g03506 WRC 1.1e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03506 2 36363216 36366116 Pste2g03506 2 36363216 36366116 ECH