Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03488 TTCTAAACCTGTCTTTGAGAACCCTCGTCGGTCGCAAGAATTGAGTCGCAGAGACAGAAAGATTTTGGGAATAAGGAATTTTGGTGGTAAGCTAATATTGGAATTTGATTTGATTGTTGAAAGAATAAAAGAGAAGAATGGGATCGGAGACGAAGTTCCTACAAGACCTGTTATTGTACGCGGCGAGCGCGGCGCTGAGTTGCTTGGTATTATTCGCGGGACTGAGACACCTTGACCCCAATCGCGAAGCATCCAAGAAGGCTCTCGAACATAAGAAGGAGATTGCCAAGCGTCTCGGTCGACCTCTCATTCAGACCAACCCTTATGAGGATGTTGTAGCCTGTGATGTTATAAATCCTGACCACATTGATGTGGAGTTCAACTCTATTGGGGGACTGGAAACAATAAAGCAAGCTTTGTTTGAGCTTGTTATTCTGCCTCTAAAAAGACCAGACTTGTTTTCACATGGAAAGCTTCTTGGACCACAGAAGGGGGTCCTGTTGTATGGACCACCTGGCACTGGAAAAACCATGCTTGCCAAAGCTATTGCTAAAGAATCTGGAGCTGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTCGGGGATGCCCAAAAGCTTGTGGCTGCAGTATTTAGCTTGGCCTATAAGCTTCAGCCTGCCATCATATTTATTGATGAAGTAGACAGTTTTTTGGGACAGCGCCGCACAACAGATCATGAGGCTTTGTTAAACATGAAAACTGAATTCATGGCTCTGTGGGATGGATTTACCACAGATCAGAATGCTCGAGTTATGGTCCTTGCAGCAACGAATCGTCCTTCAGAACTTGATGAAGCAATACTTCGGCGTCTTCCTCAAGCTTTTGAAATTGGAATTCCTGACCAAAGGGAGAGGACTGAAATATTGAAGGTTATCTTAAAGGGTGAGAGGGTTGAAGACAATATAGACTTTGTTCATATAGCTGGATTGTGTGAGGGTTACACCGGTTCAGATCTATTTGATCTTTGCAAGAAAGCTGCCTATTTTCCTATTAGAGATCTACTGGACGAAGAGAAGAAAGGAAATCGATCTCCTGAACCTAGACCTTTGTCCCAGTTAGATTTGGAGAAGGCCCTTGCTACGTCACAGAAGACAAAGGTTGCTGCAAGTGAATACAGTGGATTCAACCTTCAGTCGCCTTCAAGATGGTCAGTGCCTGGTGAGTCAGAGTAAGCTTAAGACTCGTCAAGACTATGCAGTGTGTGTATCAAGTTGCCAACAGCCATCAATTATTGAGACCTCGGAGAAATAACTGGCATTGGAGTGGGTTCGGCAGGGTTATAATTTTAAGCAGTGGGTCAGTTATCATCCTTGTGTTTTTGTTGTCTTTCTGGTCCACCCGCATATGCTGATGATTAGCTCAAACCCTTGAAAGTTGCGAGTTCTTCCCATCACATTCATTCATTATGTAGTTAGGACCACAAATTTGTTCTTTTTCCCCTCTCAAAACATAATTTCTACAGTGAAGGCAGGACCACTCTGTAGGGGGCGTATCTTCCTCACTTTGTTCCGGGTGATGCCTGCCTCGTGGTTCCATCATTACATAACCACTTGTAAGGTTGAGAGGGGCAAAAGTTCAAGTTAAAAATCGAATAAAAATAAGATGACGG 1660 0.4361 MGSETKFLQDLLLYAASAALSCLVLFAGLRHLDPNREASKKALEHKKEIAKRLGRPLIQTNPYEDVVACDVINPDHIDVEFNSIGGLETIKQALFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGIPDQRERTEILKVILKGERVEDNIDFVHIAGLCEGYTGSDLFDLCKKAAYFPIRDLLDEEKKGNRSPEPRPLSQLDLEKALATSQKTKVAASEYSGFNLQSPSRWSVPGESE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03488 361 Pfam ATPase family associated with various cellular activities (AAA) 120 249 IPR003959 GO:0005524|GO:0016887
Pste2g03488 361 Gene3D - 251 333 - -
Pste2g03488 361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 308 IPR027417 -
Pste2g03488 361 CDD RecA-like_ATAD1 83 248 - -
Pste2g03488 361 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Pste2g03488 361 FunFam ATPase family AAA domain-containing protein 1 78 255 - -
Pste2g03488 361 SMART AAA_5 116 252 IPR003593 GO:0016887
Pste2g03488 361 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 343 - -
Pste2g03488 361 ProSitePatterns AAA-protein family signature. 222 241 IPR003960 GO:0005524|GO:0016887
Pste2g03488 361 Gene3D - 78 336 IPR027417 -
Pste2g03488 361 Pfam AAA+ lid domain 272 308 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03488 Pste-Chr2 35918652 35927672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03488 37 323 Calmodulin-binding Proteins AT3G56690 32.192 2.34e-38 144