Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03480 AGAAATTCCTTGAGAAAGAGACCATTAGAAGCTCTTCAATCTTTTTACTACCCAATCTCTCATGATATTATGGTGGACCCTATGGAGACTTTCATTGTTAAGACATTTGAGAAAAGCGCAATAAAGATATGGTTTGCTGAAGGGAACAATATCTGTCCCTTGACCAGACTTCTTAGTTCTAAAAATTGTGAAATAAAGAAGCGTGTTCTACGTATTTTGTCTATCCTTGCAATGGATAATACAAAGAACAAGATAGTGATGCTTTTTTTCTGGCAAGAAGATATTGCTAAAGTGGATAATTCACTTGGATTAATTGTTCGCTTACTTTCACGTCAAGTTAAGGAGCACAAGCTGGCATTGGAGTTGCTATTAGAGTTATCTAAATGTAAAATAGTGTGTGGTCTTATAGGAAACATTCAAGGAAGTATACTTCTCCTAGTAACAATGTTAAAGAGTGATGATGTTGAAGCAGGAAAAAATGCACAAGAACTATTGGAGAATATCTCTTTCCTTGAGCAAAATTCACTGATTGTTAATACTTATTTCCTTGATCTAGGAACACCAAATATGAAAATAATCATGACTAAAACTTTGTCAGAAATTACATTAACCGACCAAAATAAATTGTCCTTGGTCAAAAATGATGCATTGCAACCACTTCTTCAACTACTCTTAAATGATGATGTGGAAATCAAGAAAGTGGTTGTCAAAGCTCTACTACAACTCCCAAGCTTGCCAGAGAATAGCCTTCAGATGATCAAGGAAGTTCATGTGAATGCTTTGAAGCTTTTCTATTACTTGACAGAAGATGGTGATTATGGCAATATCTCATCACATATAACTGAAAGATTCATTAAAGTCTTACTTACCATCATTAAGGCTTCTGATGATGCAGAAGAGATGATTACTGCTATGGCCTATGGGTATCATCTTGAAACTACCATAAAAGTCTCAATTAACCTATATAAACATGCCTCACATAAAATGCAAGTCACAGAGAATTCTGTTCAAGCTCCATGTCGTTTTAATGTCTTGACAAATTTGGAGTGGCAGAAGAGAGTGGCTTTAGAAGGCATAATCCCAATGTTGGTGCATTTGCTGCCTTATGAAACACCCTTTACAAAACAAAATGCAACCATTTTGATCAAACAATTTTCAAAGGTTCATATGCTTGAGCGAGATGATAAAGAAGCTAAGTATTTTCAAATGTTACAAGATATCAAAATGCGTGAAGCTTCATTAGATGTGCTGCTAACTTTGGTTGATAATGAAGCACTACAAAGTGGAAGTAAAGTAAAAGTTCTAATAGCTTTAGAACGAATTTTTCAACTAGATGAAGTTAGAAATAGGTATAAAATTGTGGTCACGATGACCCAA 1377 0.3471 RNSLRKRPLEALQSFYYPISHDIMVDPMETFIVKTFEKSAIKIWFAEGNNICPLTRLLSSKNCEIKKRVLRILSILAMDNTKNKIVMLFFWQEDIAKVDNSLGLIVRLLSRQVKEHKLALELLLELSKCKIVCGLIGNIQGSILLLVTMLKSDDVEAGKNAQELLENISFLEQNSLIVNTYFLDLGTPNMKIIMTKTLSEITLTDQNKLSLVKNDALQPLLQLLLNDDVEIKKVVVKALLQLPSLPENSLQMIKEVHVNALKLFYYLTEDGDYGNISSHITERFIKVLLTIIKASDDAEEMITAMAYGYHLETTIKVSINLYKHASHKMQVTENSVQAPCRFNVLTNLEWQKRVALEGIIPMLVHLLPYETPFTKQNATILIKQFSKVHMLERDDKEAKYFQMLQDIKMREASLDVLLTLVDNEALQSGSKVKVLIALERIFQLDEVRNRYKIVVTMTQ 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03480 459 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 86 IPR013083 -
Pste2g03480 459 Gene3D - 141 316 IPR011989 -
Pste2g03480 459 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 8 56 - -
Pste2g03480 459 SUPERFAMILY ARM repeat 42 450 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03480 Pste-Chr2 35764997 35774807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03480 15 261 U-box Gene Family AT1G23030 26.070 3.93e-11 63.2